Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0139 ATGCAGGTTCTTCCCATATTTCAATGGGCAGGTCTAGGCTTCTTTATATCCCTGCTGTTTGCTGTGAGCTTCTGCCATGGCAACAACCAGGAAGTCATGGTCGTTGGGACAGGAGAATGTGCAGACTGTGATCACAGTAACATTAAGACTAGCCAAGCATTTTCAGGCCTCGGTGTAACCATTGAATGCAAGCTAGAAAGCGGGGAGTTCAAAACAAGGGCAGTTGGAGAGCTTGATGAAGAAGGGGAGTTCAAACTTCCTCTTCCTAAGGAGATAGTAAAAGGTGGAAAGTTGAAGGAGGAATGCTTTGCACAGCTTCACAGTGCCTCGGCAAAACCTTGCCCAATCAGAAATGGCCCAGAGGCTTCCAAGATAATTTTGAAGACCACAAACAATGGCAAACAGGTGTTTGCCCCGGCTGGGAAACTAAAATTCTCGCCAGTGACATGCACTTCAGCCTTCTTATGGCCTTTCTACAAGTACCCGCCTCTTCCCACACTTCCACATTGGCCCAAGCCTCTGCCCAAGTTCTACCTTCCACCTTTCTCTCCAGTCCCTACTCCAATTACATACCCTGCACCAGAAGCTGATCCTCCAGTCTCTCATCCCCCACCCCCACCAGTCTATAAACAACAAATTCCACCAAGTGTGCCACCATACACAGCCCCATCTCCACCTCAAGTCTATGATCAACCAAGTCCACAACCAGTATACTACGAGCCACATCCACCACCAGTGCCCATATACCATAAGCCCCTTCCTCCACCAGTACGAGTGTATGGACAACCATTTCCATCGCCAGTGCCAGTATACAAGAAGCCACTTCCACCGCCAGTGCCCATATACAAGAAGCCGCCTCTTCCATCACTTCCACCACCTGTGCCAGTTCATAAGAAGTCACTTCCTCCACCAGTTCCAGTATATGAAACGCCTTATCCACCTCCTTTTCCTGAGCAACCGCTTCCACCACCAGTACCAATATACAAGAAACCACCACTTCCACCACCAGTTCCAGTTTCTCAGGAGCCACTCCCACCACCTAGTCCAGTGTATAATGAACCACTTCCTCCTTCTCCAGTTCCAGTTCTCAAGAAGCCTATTCCACCTATTGTTGAGAAACCACTGCCACCACCTGTGCCAATATTCAAGAAGCCAGCACTTCCACCCCCGGTTCCTGTCTACAAGAAGCCGCCACTTCCCCCACCTCCACCACCTGTTCCAGTCTATGGGGAACCATTGCCTCCTCCAGTTCCAGCCTTCAAGAAGCCATATCCACCGCCTCTTCCGATAGTAGAGAAGCCACTTCCACCTCCAATTCCAATTCACAAACCAATTCCTCCAATCTCCAAGCCTGCCCCAACTCCAGAGGTCCTTCCTGCTCCACCTCCAATTTACAGTCCAAAACCTCCAATCCTCAACCCTACTCCAAAGCCAAAAGTCCTACCACCACCACAGCCAGTACCCATAACCAAAAAGCCACTTCCACCACCTGTTCCCATTCAAAAACCAGTACCAGCAGCCCAAAATCCTCCTCCAGTTTACAAGAAGCCACTTCCACCCATTCCCAAAGCCCCCGCTCTTCCTAAGCTTCCTCCTCTGCCCAAAACTCCTCCGAAGTACTTCTACCACCCAAAGTATGGACTGGGTAACGCCAAACCACCTAGTTCATCTCATCCGTAG 1680 0.5012 MQVLPIFQWAGLGFFISLLFAVSFCHGNNQEVMVVGTGECADCDHSNIKTSQAFSGLGVTIECKLESGEFKTRAVGELDEEGEFKLPLPKEIVKGGKLKEECFAQLHSASAKPCPIRNGPEASKIILKTTNNGKQVFAPAGKLKFSPVTCTSAFLWPFYKYPPLPTLPHWPKPLPKFYLPPFSPVPTPITYPAPEADPPVSHPPPPPVYKQQIPPSVPPYTAPSPPQVYDQPSPQPVYYEPHPPPVPIYHKPLPPPVRVYGQPFPSPVPVYKKPLPPPVPIYKKPPLPSLPPPVPVHKKSLPPPVPVYETPYPPPFPEQPLPPPVPIYKKPPLPPPVPVSQEPLPPPSPVYNEPLPPSPVPVLKKPIPPIVEKPLPPPVPIFKKPALPPPVPVYKKPPLPPPPPPVPVYGEPLPPPVPAFKKPYPPPLPIVEKPLPPPIPIHKPIPPISKPAPTPEVLPAPPPIYSPKPPILNPTPKPKVLPPPQPVPITKKPLPPPVPIQKPVPAAQNPPPVYKKPLPPIPKAPALPKLPPLPKTPPKYFYHPKYGLGNAKPPSSSHP* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0139 559 MobiDBLite consensus disorder prediction 442 559 - -
Vvi3g0139 559 PANTHER OS10G0148100 PROTEIN 18 241 - -
Vvi3g0139 559 MobiDBLite consensus disorder prediction 193 236 - -
Vvi3g0139 559 MobiDBLite consensus disorder prediction 442 539 - -
Vvi3g0139 559 PRINTS Proline rich extensin signature 168 184 - -
Vvi3g0139 559 PRINTS Proline rich extensin signature 214 235 - -
Vvi3g0139 559 PRINTS Proline rich extensin signature 241 257 - -
Vvi3g0139 559 PRINTS Proline rich extensin signature 196 208 - -
Vvi3g0139 559 Pfam Pollen protein Ole e 1 like 34 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0139 Vvi-Chr3 1291536 1293360 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0139 - - vvi:100252056 460.685