Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0136 ATGGCGATTAGGGTTTTCTTTCTGGCTTTCCTCCTCCTCTGCTCTCCCTTCCTTCAAGTTGCTAGATGTCAATCGGAGGTGGAAGTTTCCGAAGCTGCTGAAGAAGGAGGTGATCTTGGCATTGTTGGCGAGGATGCCCAGGACTTTGGTGATGGGAGTTTCAGTCCGGCACCGGGAGTGGATACAGTCTGTGTTTTCCCCAAAAATTCGGCACGATTGGTGACAGCAGGGGAAGAGGCTGAGCTATTAGTTGGAATGAAAAATGATGGAGAGTCTAGCTTGAATGTAATTGCAGTTAAGGCCAGTGTCCATCTTCCTTTTAATCACCAGCTGCTGGTCCAGAACCTTTCTACACAGGGTTTTAACAATGCATCAGTTCCAGCCTCAGCTCAGGCTACTTTCCCATACATATTTGCTGTTAGCAAGTACTTGCAGCCCGGAACATTTGATCTTGTGGGCACCATTGTTTATGAGATAGACCAGCATCCCTATCAAAGCGTTTTCTACAATGGAACCATTGAAGTTGTTGAGGCTGGCGGTTTTGTCAGCATTGAGTCTGTTTTCCTTGTCTTCCTTGGAATTGCCCTACTTGTCTTTTTTGGAGTATGGATACGTGGCCAAATACAAAACTTATCCAAGAAAACTAAGAGGGCGCCAAAGGTAGAAGTTGGAACTGGGACTACAGATGCCTCACTGGATGAGTGGCTTCAGGGGACTGCGTATACTCAATCATTGTCCAGCAAATCAAAGAAAAAGAAGTGA 762 0.4606 MAIRVFFLAFLLLCSPFLQVARCQSEVEVSEAAEEGGDLGIVGEDAQDFGDGSFSPAPGVDTVCVFPKNSARLVTAGEEAELLVGMKNDGESSLNVIAVKASVHLPFNHQLLVQNLSTQGFNNASVPASAQATFPYIFAVSKYLQPGTFDLVGTIVYEIDQHPYQSVFYNGTIEVVEAGGFVSIESVFLVFLGIALLVFFGVWIRGQIQNLSKKTKRAPKVEVGTGTTDASLDEWLQGTAYTQSLSSKSKKKK* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0136 253 Pfam Translocon-associated protein (TRAP), alpha subunit 38 238 IPR005595 GO:0005789
Vvi3g0136 253 PANTHER TRANSLOCON-ASSOCIATED PROTEIN, ALPHA SUBUNIT 4 252 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0136 K13249 - vvi:100250330 471.855