Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0130 ATGGAATGTCGGGTTCATGACCTTGTACGAGAGTTGGCTATTGAAAAGGCAAAAGAACAAAACTTCATTGGAACTAATATTGCAGATCCTCCACCCTCCTCCACCAGTTCATCTCTCTTTTCATCTAAATCCCGTCGACGAAGTATTTATTCTGACTTTGAGAGGTGCGCTTCCATTGAACATTTAACTCCATATCTTCGATCTCTTTTATTTTTCAATTTGGGGAAAAATTGTAGAGCATCACAACTAGATTTCATTGCCAAATGCTTCAAAGTGCTTAGAGTGTTAGATTTGGAAGGTTTAAAAATTGAATGCCTACCTAGTATGATTGGGGAACTGATTCATTTAAGGTACTTGGGATTAAGGCATACTGGTCTAAAAATGCTTCCACCATCTATAGGCAACCTAAGGAGTTTTCAGACTTTGGAGATAAACAATCTTAGACAAGTGTCAAATGTGATACGGAAGATTAAGAACATGAGATATCTTTACATGGAGGGGCAAGAGGAAGATGTTCCACTGCAAATTCATACGTTGCAAAATCTTCAAATTCTATCAGGCATAACCTTCAACCAATGGATCAAGAACGATTCAAGCAACTTAACTTGTCTTGAGAAATTGAAATTAGAAGGAAAGTGTGAGGTAGAAGGGGCTGTGTTTTCAAACTCCATTTCCAAGCTACCTAGTCTTAAATCCTTGTACCTTAAGGCATCAGATGAGTTGAGCATTCCACCCCTTGCCATAAACTCTTGCCTCCATCTTTCTAAGTTGGACATAAAGGGACACATGCAAAAATTGCTTGAAACCGTTGAATTCTCACCAAATCTTACACAATTGACATTGGAAGCATCTAGGCTAGGTTGTGATCCTATGCCTGTTTTAGAGAAGCAACCAAAATTGTTGATTCTTAGATTAAGGGCAAACGCACACCTTGGAATGAAAATGCAAGTGTCTGCAAATGGGTTTCCTCAACTCAAAGTACTTCAACTTTCAGAGTTACAAGGATTGACTGAGTTGAATATAGGGAAAGGCGCAATGCCATGGCTTAAGCAATTGCAAATTCATAAACGAGTGAATATCTTAGGATTTATTGGGCTTCTAAAGCTAGTGGAGCTAAACATTATAGGTCAACCATTTCCTATTATGATGTACCTAAAAGTTGGCCATGTGATACTCAGATTTGTGTTGCAACAAGTCAAACAGCAGAAAGCTCTAGGAAAGCAGTTGAAATATTAG 1236 0.3835 MECRVHDLVRELAIEKAKEQNFIGTNIADPPPSSTSSSLFSSKSRRRSIYSDFERCASIEHLTPYLRSLLFFNLGKNCRASQLDFIAKCFKVLRVLDLEGLKIECLPSMIGELIHLRYLGLRHTGLKMLPPSIGNLRSFQTLEINNLRQVSNVIRKIKNMRYLYMEGQEEDVPLQIHTLQNLQILSGITFNQWIKNDSSNLTCLEKLKLEGKCEVEGAVFSNSISKLPSLKSLYLKASDELSIPPLAINSCLHLSKLDIKGHMQKLLETVEFSPNLTQLTLEASRLGCDPMPVLEKQPKLLILRLRANAHLGMKMQVSANGFPQLKVLQLSELQGLTELNIGKGAMPWLKQLQIHKRVNILGFIGLLKLVELNIIGQPFPIMMYLKVGHVILRFVLQQVKQQKALGKQLKY* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0130 411 SUPERFAMILY L domain-like 4 380 - -
Vvi3g0130 411 Gene3D Ribonuclease Inhibitor 29 384 IPR032675 -
Vvi3g0130 411 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 43 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0130 Vvi-Chr3 1224505 1226936 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0130 - - vvi:104877365 630.172