Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0124 ATGCTTCCACCATCTATAGGCAACCTAAAGAGTTTGCAGACTTTGGATATAAACAATCTTAAAGAAGTGCCAAATGTGATATGGAAGATGAAAAACATGAGGTATCTTTATATTGAGGGGCAAGAGGAAGATGTTCCACTGCAAATTGATACATTGCAAAATCTTGAAATTCTATCTTGCATAACCTTCAACCAATGGATCAAGAATGATTCAAGCAACTTGACTTGTCTTGAGAAATTGAAATTAGAAGGAAGATGTGAGGTAGAAGGGGTTGTGTTTTCAAACTCCATTGCCAAGCTACCTAGTCTTAAATCCTTGTACCTTAAGGCATCAGATGAGTCTAACATTCCACCCCTTGCCATAAACTCTTGCCTCCATCTTTCTAAGTTGGACATAAAGGGACACATGCAAAAATTGCCTGAAACCGTTGAATTCTCACCAAATCTTACACAATTGACAATGGAAGCATCTAGGCTAGGTTGTGATCCTATGCCTATTTTAGAGAAGCAACCAAAATTGTTGATTCTTAGATTAAGGGCAAACACATACCTTGGAAAGAAAATGCAAGTGTCTGCAAATGGGTTTCCTCAACTCAAAATACTTCAACTTTCAGAGTTAAAAGAATTGACCAAGTTGAATATAGGGCAAGGTGCATTGCCATGGCTTATGCAATTACAAATTCGTGATAAGGTGAAGATCTTAGGATTTAATGGGCTTCTAAATCTAGTGGAGCTAAACATTATGGGTGGATCATTTCTTAACATGAGAATCGCGAAGTCGCTCTTTTCGAATGGTGTACCTCATCCTTGGCATAGTACAAGATTGGAGTTAGAATTTACCGCGAAAAAGGTAAGCTTGGAAGTCTGGAATTCACTTTTACCCTTGGTGATTGTTGGGGTGTATAAATGCATGTTTTTGTTCCTTTACGTGGATGTGATTTCTACCAATTCAGCCTATTTTTTTTTTTAG 969 0.3767 MLPPSIGNLKSLQTLDINNLKEVPNVIWKMKNMRYLYIEGQEEDVPLQIDTLQNLEILSCITFNQWIKNDSSNLTCLEKLKLEGRCEVEGVVFSNSIAKLPSLKSLYLKASDESNIPPLAINSCLHLSKLDIKGHMQKLPETVEFSPNLTQLTMEASRLGCDPMPILEKQPKLLILRLRANTYLGKKMQVSANGFPQLKILQLSELKELTKLNIGQGALPWLMQLQIRDKVKILGFNGLLNLVELNIMGGSFLNMRIAKSLFSNGVPHPWHSTRLELEFTAKKVSLEVWNSLLPLVIVGVYKCMFLFLYVDVISTNSAYFFF* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0124 322 Gene3D Ribonuclease Inhibitor 1 280 IPR032675 -
Vvi3g0124 322 SUPERFAMILY L domain-like 2 251 - -
Vvi3g0124 322 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 1 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0124 Vvi-Chr3 1082216 1083954 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0124 2 205 Receptor kinase-like Gene Family AT3G28890 29.358 7.28e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0124 - - vvi:104877365 438.343