Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0106 ATGGCTGCTGGTTTGAAGCGAGACCCTATTGTGATCCTCCGTATTGATGGGGAAGACCTGGGGGAGTTCATCAACAGCCCAAGTTTTGAACCAGAGATGATTTCCATCTTCTCAGAGTTTGATTTGCCTGAAGGATCACTTCGCGATTACATTACCAAGGCTTTGCAACAACTTACTGTTGAACAAGGAATGCCACCTTCAACAGATTCTTGGGTCATGAGTAACATTGTGGAGCCTGCTCTGCAAACTGTTGCTGGCTGTGCTCATGAGCAACCCATCTCTCAAGATACTTTCCTAGCGGAATTCAAAAAGGTTGCAGAAAGTGTGGCTCAACATCTGGCAGAGCAGCCAGTGATTGTTGCCCACAGTGAAAACACGTTTGATGGAAGTGGTATTAAGAGACTATTGGCCAACAAATTTGAATTAGATAAGTCATTGGAAGCAGCATTAAAGACAGTGCCAAAAGATCGCAATGGGAAAATGTCTAAGGAGTATCTCCGTGTGGCATTGGATGTTGTGGGCCCATCAGCAGGTTTACCCCCATATGGTGGGCTTGAAGAGATGGACAAGGTAGTGACTGATGTGTTCAATATGGTGAATGCTGATGATGGGAAGGTTGTTAAAGAAGATGAGTTCAAGAAGTTGCTGACTGAAATCCTGGGAAGTATCATGTTGCAATTAGAGGGCAGTCCTATCTCAGTTTCTTCAAACTCGGTCGTGCATGAGCCCCTTACTTCTTCAACACTTTTGTCACCATCTTCATAA 765 0.4458 MAAGLKRDPIVILRIDGEDLGEFINSPSFEPEMISIFSEFDLPEGSLRDYITKALQQLTVEQGMPPSTDSWVMSNIVEPALQTVAGCAHEQPISQDTFLAEFKKVAESVAQHLAEQPVIVAHSENTFDGSGIKRLLANKFELDKSLEAALKTVPKDRNGKMSKEYLRVALDVVGPSAGLPPYGGLEEMDKVVTDVFNMVNADDGKVVKEDEFKKLLTEILGSIMLQLEGSPISVSSNSVVHEPLTSSTLLSPSS* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0106 254 SUPERFAMILY EF-hand 96 216 IPR011992 -
Vvi3g0106 254 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 15 239 - -
Vvi3g0106 254 ProSiteProfiles EF-hand calcium-binding domain profile. 141 176 IPR002048 GO:0005509
Vvi3g0106 254 Gene3D - 44 224 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0106 1 254 EF-hand Containing Proteins AT4G38810 65.385 1.03e-116 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0106 - - vvi:109122358 473.781