Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0105 ATGATGGGGTCTTTTCTTTCAAGAGCTCTCATGCTGACTTTTGGTTATGCTTATCCTGCATATGAATGCTTCAAAACTGTGGACAAGAATAAGCCAGAGATCGAGCAACTCGTGCTTTGGTGCCAGTATTGGGTTTTAATTGCCTTGCTTACCATTTGTGAGAGAGTGAGTGATGCTTTCATTTCATGGTTACCATTGTATGGGGAAGCCAAGTTGGCCCTTTTCATATATCTTCGGTATCCTAAAACAAAAGGAACGACATACATTTATAATTCCTTTTTACGGCCTTACTTAGCAAAGCATGAGACTGAAATAGACCGAAATTTGTTGGAGTTAAGGGTTAAGGCCAGGGAGATTGCAGTTGTGTATTGGCAAAAGGCTGTCTGCCATGGGCAGACAATGTTTTTCAAGATTCTGCAGTATGTTTCTTTAACACAGCCTCAACCTGCTCAGCAACAACAGCATGCCAGAGATGGCCAACCCCTTGCTTCTTTTCTACCTCACCATGAATCTAGTTTTGAAGAATCTGCTGCAGAAGCCAGTAGCAAGCCAATATCAAGTAAACTGGAGGCAGAAAATGCAAATGCAAATGCAAATTCTCCTCAGAAAGTGAGTGTCATTGAGGGAGCTGTCCGGGTAACCTGTGAAAAACTGAGGAAAATCCGGGGCTCAGCTAATCAGTAG 684 0.4269 MMGSFLSRALMLTFGYAYPAYECFKTVDKNKPEIEQLVLWCQYWVLIALLTICERVSDAFISWLPLYGEAKLALFIYLRYPKTKGTTYIYNSFLRPYLAKHETEIDRNLLELRVKAREIAVVYWQKAVCHGQTMFFKILQYVSLTQPQPAQQQQHARDGQPLASFLPHHESSFEESAAEASSKPISSKLEAENANANANSPQKVSVIEGAVRVTCEKLRKIRGSANQ* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0105 227 MobiDBLite consensus disorder prediction 176 201 - -
Vvi3g0105 227 Pfam TB2/DP1, HVA22 family 19 97 IPR004345 -
Vvi3g0105 227 PANTHER HVA22-LIKE PROTEINS 12 140 IPR004345 -
Vvi3g0105 227 MobiDBLite consensus disorder prediction 177 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0105 Vvi-Chr3 967780 969830 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0105 - K17338 vvi:100257186 422.55