Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0104 ATGGATGGTGAATCCAATCAATTTGAACGAAAGCAAGAACGTTTGAGGACAAGGTGGACAGCATCTCAAGATAAGATATTTGCAGACTTGGTGGTTGAGCAAATTCAGCTGGGGAACCGATCAAACAATGGTTTTGACCAGAAAGCTTGGAAGCATATCCGCGATCAGTTCAATGCACAAACAGGTCTCAACTTCAACAAAAAACAATTGAGGAAACACCTAGATGTTCTCAGGACACGGTATTATAATCTTAAGCCAGCTTTTGAGCAAAGTGGCTTTTATTTGGACCAATCTAATCATATGATAATGCCTGAGTTTGAACTATTGGAAGACCTCACTGAGGAACACAGTAAGCCTGAGATGCTGAAAATCAAGGATTGTCACATATATGACCAGCTGTGCTTGATATTCAATGAGCCAGGGTTGGATGGGAGATATGCTCAGTCTAGTCACTATGAAGGTTTGGAAAAGAACATGGAAGCACTCCAGAATACAGGCTTGAAATCATCTCCTAGAAGTGCAAGTATGCTTGTTGGAACTGTTGCACAAACCATGCCTCGTCAAGATAATGCTCCATCACCAGCAGCAGGTGTCAACGTGAATGCATCGGCAAATGGACTAAAGAAGCGCCCATCTGAGACACATCTCAGTCCACGACATCATGCAAAAGACCAGGAAAGATTGAATGGGATCATTGCAGAAGCTATGTTAGAGATGATTTCAGCTTCAAAGTTAAGGGTAGTTGCAAGAACTCAGGATAACAACCAATTTTCCATCACCAATTGTATCAAGGCATTGGATGAGATTCGAGGCATTGATCAGAGCCTGTACTTTGCCGCATTGGATCTGTTCGACAACTCCAATCAAAGGGAGATATTCTTGTCTCTTAAATGTGAGAAGCGATTAGCATGGTTGCAAGGAAAATGTAAAAATGCTTCCCCTATTTTAGTTTGA 954 0.4172 MDGESNQFERKQERLRTRWTASQDKIFADLVVEQIQLGNRSNNGFDQKAWKHIRDQFNAQTGLNFNKKQLRKHLDVLRTRYYNLKPAFEQSGFYLDQSNHMIMPEFELLEDLTEEHSKPEMLKIKDCHIYDQLCLIFNEPGLDGRYAQSSHYEGLEKNMEALQNTGLKSSPRSASMLVGTVAQTMPRQDNAPSPAAGVNVNASANGLKKRPSETHLSPRHHAKDQERLNGIIAEAMLEMISASKLRVVARTQDNNQFSITNCIKALDEIRGIDQSLYFAALDLFDNSNQREIFLSLKCEKRLAWLQGKCKNASPILV* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0104 317 MobiDBLite consensus disorder prediction 188 224 - -
Vvi3g0104 317 MobiDBLite consensus disorder prediction 188 210 - -
Vvi3g0104 317 Pfam Myb/SANT-like DNA-binding domain 18 103 IPR024752 -
Vvi3g0104 317 PANTHER - 9 308 IPR045026 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0104 Vvi-Chr3 964896 965980 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0104 - - vvi:104878521 636.336