Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0065 ATGGAGAGCGGTTCCCAGAGACGATTAGATTCACTTTCTCGCCATTTCTTGCAGCCCCATCAAGCCAATCGATCTCTTTTTCCAAATCTACTAAGAGGGGTACATGTGAAAGATGTGGAGGCAGACCCAGTGCTAATAGGAGGTATGGTGTTGGATATACAAGCCACTCCTTCGATTTCTGCAAAACCCAAAACTACAACCCCTGGAAAGGTCCACTATGTACCAGGAGGTGTGGCAAGGAACATTGCTGAGTGTATGTCAAAACTCGGAACAAAGCCTTACATGATTAGTGCTCTGGGCCTTGACATGGCAGGAAATATGCTGTTGGAGCACTGGAAATCTGCACGGCTATCTATGGAAGGCATTCGAAAGCACCATGATATCCAGACATCTGTTGTGTGTCACATATTTGATGGTGATGGAGAGCTGGCAGCAGGTGTTGCAAGTGTGGAAGCGATTGAAAATTTTCTCACATCTGATTGGATTAGGCAATTCAAGTGCAATATATGTTCTGCTCCAGTGTTGATGGTTGATGCAAACTTGAGTCCTTCTGCTCTTGAAGCTTCTTGCCAGATGGCAGCTGAGTCTAGCACTCCAGTGTGGTTTGAACCTGTTTCAGTAATAAAATCCAGAAGAGTTGCTTCAGTTGCCAAGTATATAACTTTTGCATCACCTAATGAAGATGAACTTATTGCCATGGCAAATGCTTTGTCTTGCAAAGATGTGTTTCATCCAATTCAGCGGGACTATGTTGGAACTAAATGCTCAATAGAATCTTTGTTTCAAATGCTAAAACCAGCAATCCTGGTTTTGCTGGAAAAGGGTATAAAAGTAGTTGTCTTGACTCTGGGATCAGATGGGGTTTTCCTATGTTCTAAAGAAGGACCCGGCTTTATGAACAACGTTCTGAAAGGAACCAAACCTCAAGGCTTCGGCAGCCAGTTATATGAAATTATAACTGAAAGCTGTCCTTCCAATCTGTTTTTAAACATTGCAACTTCTTCAAGCAAAACTTATCCCTTTGCTGTTCATCTTCCGGCACTTCCTGCATCGGTTGCAAGGCTTACAGGGGCTGGGGACTGCTTGGTTGGTGGAACACTTGCTTCTATGTGTGCAGGTCTAGATGTTTTGCAAAGTGTGGCAGCTGGTATTGCAGCAGCCAAAGCTGCTGTTGAGGGAGAGACCAATGTCCCTTCTGAATATAGTTTGGCCAAAATTGCAGATGATGCCAGACGTGTGTGCTCTTCTGCCAAAGTCATATCCCATCGATCAATGTTGTGA 1281 0.4411 MESGSQRRLDSLSRHFLQPHQANRSLFPNLLRGVHVKDVEADPVLIGGMVLDIQATPSISAKPKTTTPGKVHYVPGGVARNIAECMSKLGTKPYMISALGLDMAGNMLLEHWKSARLSMEGIRKHHDIQTSVVCHIFDGDGELAAGVASVEAIENFLTSDWIRQFKCNICSAPVLMVDANLSPSALEASCQMAAESSTPVWFEPVSVIKSRRVASVAKYITFASPNEDELIAMANALSCKDVFHPIQRDYVGTKCSIESLFQMLKPAILVLLEKGIKVVVLTLGSDGVFLCSKEGPGFMNNVLKGTKPQGFGSQLYEIITESCPSNLFLNIATSSSKTYPFAVHLPALPASVARLTGAGDCLVGGTLASMCAGLDVLQSVAAGIAAAKAAVEGETNVPSEYSLAKIADDARRVCSSAKVISHRSML* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0065 426 PANTHER ZGC:136858 53 405 - -
Vvi3g0065 426 Pfam pfkB family carbohydrate kinase 44 302 IPR011611 -
Vvi3g0065 426 SUPERFAMILY Ribokinase-like 43 398 IPR029056 -
Vvi3g0065 426 CDD YeiC_kinase_like 43 380 - -
Vvi3g0065 426 Gene3D - 38 422 IPR029056 -
Vvi3g0065 426 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 76 100 IPR002173 GO:0016301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0065 - - vvi:100257294 832.017