Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0052 ATGGAGCTCTGCAGAACCACTGCTGCATTCTCATGGGCTCACTCCATCTCTCCTTCTCTTCACTTCCCTCAACGCTTCTCAATGTGTGAGAGTAAGGGGCTTAGAGTTTGTTGCGCCGTCAATGCCAGTGCTTCTGGGCAATCTCAGAAGGAAAATCAGATGATTGTGTCCGTAACAGGAGCAACGGGTTTTATAGGGAGAAGATTGGTGCAAAGGTTGCTTGCAGATAATCATCGTGTTCATGTCTTGACACGGTCTCGATCGAAAGCTCAGTTTATTTTTCCTGCCAAGGACTTTCGAGGAATTGTAATTGCAGAGGAGCCAGAGTGGAAGGACTGCATTCAAGGTTCAAATGCTGTTGTAAATTTGGCAGGAATGCCCATAAGTACAAGGTGGTCTCCTGAGATAAAAAAAGAGATCAAGGAAAGCAGGGTCAGGATTACCTCAAAGGTTGTGGATATAATAAATAACTCACAAGATGAAGTTCGGCCCACAGTTTTGGTTAGTGCATCAGCGATTGGTTACTATGGCGCAAGTGAAACACTAGTATTTAAAGAGCAAAGTCCATCAGGAAATGATTACTTGGCTGAGGTTTGTAGAGAATGGGAAGGCAAAGCATTCAAAGTAAATAAGGATGTTCGCTTGGTGCTTATTCGAATTGGTGTTGTTCTTGGAAAGGATGGTGGTGCTTTAGCTAAAATGATCCCTCTCTTCAATTTGTTTGCTGGTGGACCTTTGGGCTCTGGTAAACAATGGTTTTCCTGGATTCATCTGGATGATATAGTGGAGCTAATATATGAAGCATTGTCTAATCCATCATATACAGGAGTTATAAATGGAACTGCACCAAACCCTGTCCGTCTGGCTGAGATGTGTGACCATTTGGGAAATGCCATGGGCCGACCCTCATGGCTGCCAGTACCCGATTTTGCACTCAAAGCAGTCCTTGGAGAAGGTGCTTCTGTGGTCTTGGATGGGCAAAAAGTGCTCCCTGCTAGAGCCCAGCAGCTGGGTTTCACATTCAAATACCCATATGTGAAAGATGCACTAAGAGCCATTCTTCTTGGGAGTTAA 1074 0.446 MELCRTTAAFSWAHSISPSLHFPQRFSMCESKGLRVCCAVNASASGQSQKENQMIVSVTGATGFIGRRLVQRLLADNHRVHVLTRSRSKAQFIFPAKDFRGIVIAEEPEWKDCIQGSNAVVNLAGMPISTRWSPEIKKEIKESRVRITSKVVDIINNSQDEVRPTVLVSASAIGYYGASETLVFKEQSPSGNDYLAEVCREWEGKAFKVNKDVRLVLIRIGVVLGKDGGALAKMIPLFNLFAGGPLGSGKQWFSWIHLDDIVELIYEALSNPSYTGVINGTAPNPVRLAEMCDHLGNAMGRPSWLPVPDFALKAVLGEGASVVLDGQKVLPARAQQLGFTFKYPYVKDALRAILLGS* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0052 357 Gene3D - 49 344 - -
Vvi3g0052 357 PANTHER SUGAR NUCLEOTIDE EPIMERASE RELATED 48 354 - -
Vvi3g0052 357 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 52 351 IPR036291 -
Vvi3g0052 357 NCBIfam TIGR01777 family oxidoreductase 56 350 IPR010099 -
Vvi3g0052 357 Pfam Domain of unknown function (DUF1731) 307 353 IPR013549 -
Vvi3g0052 357 CDD SDR_a8 56 354 - -
Vvi3g0052 357 Pfam NAD dependent epimerase/dehydratase family 57 272 IPR001509 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0052 K07071 - vvi:100264142 707.212