Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0045 ATGGAAGCTTCATTTGTTAACCAGTTATACGATTCTTCTAATCTTCTTGGTTGGCCGCCGAGAAAATGGAATCCATCAGAGTCACAACCATCCTCACAGAAGGATTGCAACACCTGCATTTCATCTGGCCAGTTCAAGGTTCTTCGAGGTGGGTCGTGGCAGAAGATGGAGTGTGTAAGAGCTGAAAATAAGCGGCATGATGATCTTCAGTCAGATCCATGGATCAGGCATTTCAGATCTTCAAGAAGAGGCCAAGATCCAGGATTGCCGTTTCTTCAGGAGAATGCTGCTTCCACAAGTAAGGCAGTGAAGCAGAAAGGGAAACAGGCTGTGTCTTGCGGAGGAGATTCCACTTCAAGGCAGTTTCTGTTGTGGAATTCTCTCTACCATCGGGACTCAGTTGGCAGCAATATAGAGGTCTCAGGTCAGAACTTTATGGACGATGAAATTGAAGGCAGTCCAAAAAGGATGAAGACACGAGGCGATTGA 489 0.4622 MEASFVNQLYDSSNLLGWPPRKWNPSESQPSSQKDCNTCISSGQFKVLRGGSWQKMECVRAENKRHDDLQSDPWIRHFRSSRRGQDPGLPFLQENAASTSKAVKQKGKQAVSCGGDSTSRQFLLWNSLYHRDSVGSNIEVSGQNFMDDEIEGSPKRMKTRGD* 163
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0045 162 PANTHER COLD REGULATED PROTEIN 27 1 158 IPR044678 GO:0009409|GO:0042752
Vvi3g0045 162 MobiDBLite consensus disorder prediction 142 162 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi3g0045 Vvi-Chr3 584654 586269 Transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0045 - - vvi:100255572 341.273