Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0044 ATGCCGCCATTTTTGTCGACGGCTAGGGCCATTGGATCTTTGATGAGGTCTTCGAAGAAATTCAATGAGATTCGATGCGTCAGTGGCTTTAAACCGGTTCTTGGTCGCAGGGATCTGTTTGGAAGCGTTATTCAGACGAGGCGTTTTCTGGGTTGTGGAGACGGAGAAGAGGGCGGTGTTCTGTCGAAAGTGTATGAGGAGAAGCGCGTTTTAGGGTACTCTCCAGAACAGTTATTTGATGTTGTTGCAGCAGTTGACTTGTATCACGGTTTTGTGCCCTGGTGTCAGCGATCAGAGATAATTAAACACAATCCAGATGGATCATTTGATGCGGAGCTTGAGATTGGTTTTAAATTTCTTGTTGAAAGTTATGTTTCTCATGTGGAGTTAAACAGACCAAAGACTATAAAGACAACTGTCTCAGAAAGTTCCCTTTTTGACCATTTGATAAATATATGGGAATTCAATCCGGGACCAATTCCAGGAACTTGCGACATTCATTTCTTAGTGGATTTTAAGTTCCAATCCCCACTTTATCGACAGGTGGCATCCGTGTTCTTCAAGGAGGTGGTCTCTCGACTGGTTGGTTCATTCAGTGACCGCTGCCGTTTGATTTATGGACCAGGAGTGCCAGTACTTGAAAACCCCAATGAGCAAAGGCTATGA 666 0.4429 MPPFLSTARAIGSLMRSSKKFNEIRCVSGFKPVLGRRDLFGSVIQTRRFLGCGDGEEGGVLSKVYEEKRVLGYSPEQLFDVVAAVDLYHGFVPWCQRSEIIKHNPDGSFDAELEIGFKFLVESYVSHVELNRPKTIKTTVSESSLFDHLINIWEFNPGPIPGTCDIHFLVDFKFQSPLYRQVASVFFKEVVSRLVGSFSDRCRLIYGPGVPVLENPNEQRL* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0044 221 PANTHER SPERM PROTEIN HOMOLOG 44 216 IPR044996 GO:0006744|GO:0045333|GO:0048039
Vvi3g0044 221 Pfam Polyketide cyclase / dehydrase and lipid transport 72 198 IPR005031 -
Vvi3g0044 221 Gene3D - 63 207 IPR023393 -
Vvi3g0044 221 CDD COQ10p_like 65 203 IPR044996 GO:0006744|GO:0045333|GO:0048039
Vvi3g0044 221 SUPERFAMILY Bet v1-like 65 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0044 Vvi-Chr3 579750 583120 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0044 K18588 - vvi:100267514 453.366