Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0036 ATGACATGGCAAGTCCATATTGAATGCAACATTAAAGAAATTGCTGATGAAGATGAACCCCCACCAAAAAGTTCCAAAAATAAAAAGGAAAATGGACCAGAGAAATCACCGAGTCTTGTCTTCAAAATAACCAGAAAAGTTCCATATAAGACAGTTCTGAAAGTTCACAGTGCTGTTATGTTAAAGGCTGAGAGCATAGCGGATAAGGCTGAGTGGTTAAACAAATTGAGAAATGTTATTCAGCCTTCAGGTCAAGTGAAGGGTGAATCTGGTCTTACCATGCGACAAAGTCTTTCTGATGGTTCTCTTGATACAATGGCCAGAAGAACTACAGATCCAGAAGAAGAGCTCCGTTGGATGTCTCAAGAAGTGCGTGGTTATGTTGAAGCTGTTCTGAACAGCCTTGCTGCCAATGTCCCAAAAGCAGTTGTCCTTTGCCAAGTAGAAAAATCCAAGGAAGATATGCTTAATCAGTTATACAGTTCTGTCATGTTGGTACTCTTTGCCATATGGAAACACACAATTCTCTAA 531 0.3992 MTWQVHIECNIKEIADEDEPPPKSSKNKKENGPEKSPSLVFKITRKVPYKTVLKVHSAVMLKAESIADKAEWLNKLRNVIQPSGQVKGESGLTMRQSLSDGSLDTMARRTTDPEEELRWMSQEVRGYVEAVLNSLAANVPKAVVLCQVEKSKEDMLNQLYSSVMLVLFAIWKHTIL* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0036 176 ProSiteProfiles GED domain profile. 117 176 IPR020850 -
Vvi3g0036 176 MobiDBLite consensus disorder prediction 90 113 - -
Vvi3g0036 176 Gene3D Dynamin, middle domain 38 166 - -
Vvi3g0036 176 ProSiteProfiles PH domain profile. 1 81 IPR001849 -
Vvi3g0036 176 MobiDBLite consensus disorder prediction 14 37 - -
Vvi3g0036 176 MobiDBLite consensus disorder prediction 90 106 - -
Vvi3g0036 176 Pfam Dynamin GTPase effector domain 115 163 IPR003130 GO:0003924|GO:0005525
Vvi3g0036 176 MobiDBLite consensus disorder prediction 14 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0036 Vvi-Chr3 503106 504318 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0036 K01528 - vvi:100245514 273.863