Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0033 ATGTTTGGATCGAGGAGAGCGTTTTCTTTTATCAGATTGGGGGCATTGTTTGAATGGAATGGGTCAGTTGTTCATCCATTTGCTTGCAGACAGATTTCTCAGCTCGGAAATGGTCGTGGAAAGCGCGCATTTCTCGTTGATACATTGGCACTGGTTAAGAGTTTAGAAGCAGAGGGCATGCCATCAAAACAAGCTGAGGCGGTAACGACTGCTTTGACCCATGTTTTAAATGATACCTTGGAAAATTTGGCTCAATCTTTAGTCTCCAAACCAGAATTGCAGAAGGCTAGCATGTTACAGGAATCAAATCTCTCCAAGTTTAAGGTGGAAGTGCAAGGTTCACAGGAGCATCATTTTTCTCTACTGCAACGAGAAACTGAAAAACTGCGTAATGACATAGACAAAATGCGCACTGATGTGAGGCATGAGATGGACAAGATCACTGCAGGCCACCGTCTAGATTTAAATCTCGAAAGAGGTCGTATACGTGATGAGCTAGCCGAACAGGGTGCAGAAACTACCAACCTCACCAACAAACTTGATCGTGAAATTCATGCATTAAGAGCTCATCTGGAAGCAGCAAAATATGACGTTATTAAATACTGTATAGGTACCGTCGTCTCCATCTCTGCCGTTGGTCTTGCTATTATCCGGATTGTTTTGTAG 666 0.4324 MFGSRRAFSFIRLGALFEWNGSVVHPFACRQISQLGNGRGKRAFLVDTLALVKSLEAEGMPSKQAEAVTTALTHVLNDTLENLAQSLVSKPELQKASMLQESNLSKFKVEVQGSQEHHFSLLQRETEKLRNDIDKMRTDVRHEMDKITAGHRLDLNLERGRIRDELAEQGAETTNLTNKLDREIHALRAHLEAAKYDVIKYCIGTVVSISAVGLAIIRIVL* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0033 221 Coils Coil 119 139 - -
Vvi3g0033 221 Gene3D - 47 148 - -
Vvi3g0033 221 PANTHER UNCHARACTERIZED 28 220 IPR024461 -
Vvi3g0033 221 FunFam Coiled-coil domain-containing protein 90-like 47 147 - -
Vvi3g0033 221 Pfam Coiled-coil domain-containing protein 90-like 46 219 IPR024461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0033 Vvi-Chr3 462653 465274 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0033 - - vvi:100255513 429.483