Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0025 ATGGCGGCATCATCTTTATCATCTACTCATCTGCTCCACCACCTTCTCCGCCGTCCGCCGCCGTCACCCCTTGTATCCTCTTCCGTCTTCTCCTTCTTCTGCGTCTCCCCTACCACCACCGCCACTGCCGCCGCCGCCGCGGCCACTTTCTCTCCCCTTCGCACCACCCTCTTCTCCTTCCACTCCTCCGCTCGCCCTCTCTTCCTCTGCAACTCACTCTCTTCCTCCTCTGTCGCATTTCCTCAAACACCTTCTCCCCAATCCATCGAACCACATTCCATTCCCCAAGAACAATTGCTAAACGACCTTGCGGAAGAAGAAGAGAGCGGTGGCGAAATTGTGGAAGAAGAAGAGAGCGGTGGTGAAATTGCGAAGCAAGAGGAACTGTACGAATCTGAGGAAACCGTGAAGGAGACTTCGCGTCCGGTTAATTTGACGATAAAGGAGAAAAAAGAGCTGGCGTCGTATGCTCACAGCTTGGGGAAAAAGCTCAAGTGCCAATTGGTGGGGAAACAGGGTGTTACTGCTTCTGTGGCTTCTGCATTCATCGAGAACCTTGAATCCAACGAGCTTCTTAAGATTAAAATACATGGCACCTGTCCAGGGGAGCTACCTGATGTGGTGAAGCAATTGGAGGAATCAACTGGTTCAGTTGTTGTTGGCCAGATTGGTCGGTCGGTCATTCTTTACAGGCCAAGTGTCACCAAGTTGAAAGCAGAGGAGAAGAGGAAACAAGCTCGGAGAGTTTATGTTAGAAAAGGAGCCATTTTCAAACCCAAATTGCCGGGAAAATTGCTGGAGGGACAATCACCAAGGGTGCCTGGACGTGGTCGACGAGGAAGCAGCAGATTTCGAGACACATAA 864 0.5139 MAASSLSSTHLLHHLLRRPPPSPLVSSSVFSFFCVSPTTTATAAAAAATFSPLRTTLFSFHSSARPLFLCNSLSSSSVAFPQTPSPQSIEPHSIPQEQLLNDLAEEEESGGEIVEEEESGGEIAKQEELYESEETVKETSRPVNLTIKEKKELASYAHSLGKKLKCQLVGKQGVTASVASAFIENLESNELLKIKIHGTCPGELPDVVKQLEESTGSVVVGQIGRSVILYRPSVTKLKAEEKRKQARRVYVRKGAIFKPKLPGKLLEGQSPRVPGRGRRGSSRFRDT* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0025 287 PANTHER CRS1/YHBY DOMAIN CONTAINING PROTEIN, EXPRESSED 1 283 - -
Vvi3g0025 287 SMART CRS1_YhbY_2 145 231 IPR001890 GO:0003723
Vvi3g0025 287 MobiDBLite consensus disorder prediction 262 287 - -
Vvi3g0025 287 FunFam RNA-binding CRS1 / YhbY (CRM) domain protein 144 243 - -
Vvi3g0025 287 Pfam CRS1 / YhbY (CRM) domain 145 231 IPR001890 GO:0003723
Vvi3g0025 287 ProSiteProfiles CRM domain profile. 143 242 IPR001890 GO:0003723
Vvi3g0025 287 Gene3D - 143 243 IPR035920 -
Vvi3g0025 287 MobiDBLite consensus disorder prediction 104 123 - -
Vvi3g0025 287 SUPERFAMILY YhbY-like 144 233 IPR035920 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0025 K07574 - vvi:100243481 424.476