Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0015 ATGAACCAGGCTCAAACACAGTGCTCTACTGGAGTGAAAAGTCCAAGCGCAAGAACAGAGCTGAGGGAATCATGGTTACCTATAAATTCTACAATTACACGTCTGGTTACATTCATCATTGCACTATCAAGAATTTGGAGGTGGGATGTCACCCAATTCATTCATCATTTCTTTGTTTTGGGATTTCTTCTGGATACAGAGCTTGAAGCTTTTCTAATTTATTTGCAGTTCAACACCAAGTATTACTATGTGGTCGGGATTGGACACACTCCACGCAAGTTTTGGTTTGTAACTCCTCCTAAAGTTGGCCCAGATGTTCCATACACTTTTGGTCTTATAGGGGATCTTGGGCAGAGTTATGATTCAAATATGACACTTACGCACTATGAATTGAACCCTGCGAAGGGAAAAACCGTGTTGTTTGTTGGAGACCTTTCATATGCTGATAGGTACCCGAACTATGATAACGTTAGGTGGGATACATGGGGAAGGTTCACTGAGAGAAGTACTGCTTATCAACCTTGGATATGGACTGCAGGAAACCATGAGATTGATTTTGCTCCTGAAATTGGTGAGTTTATACCCTTTAAGCCTTATAGTCATCGATATCATGTCCCCTACAGAGCATCAGATAGTACCGCTCCCTTCTGGTACTCTATCAAGAGGGCTTCAGCATATATCATTGTCTTATCATCATACTCAGCATATGGAAAATATACTCCTCAGTTTATGTGGCTTGAAAAGGAGCTACCAAAAGTTAACAGGAGTGAGACACCATGGCTAATTGTTCTTATGCATTCCCCATGGTATAACAGTTACAACTATCATTATATGGAAGGGGAAACCATGAGAGTAATGTACGAGCCATGGTTTGTGCAGTACAAAGTTGATGTTGTGTTTGCTGGTCATGTTCATGCCTACGAACGATCTGAACGTGTGTCCAACATTGCTTATAACGTCATAAATGGCATTTGCACTCCTGTAAATGACCAGTCTGCACCAGTATACATCACCATTGGAGATGGGGGAAATCTCGAAGGCCTGGCAACCAACATGACAGAGCCACAGCCGAAGTACTCTGCTTATCGTGAAGCCAGTTTTGGACATGCCATTTTTGACACCAAGAACCGAACCCATGCTCAGTATAGTTGGCACCGCAACCAAGATGGATATGCCGTGAAAGCTGATTCCTTATGGTTTTTCAACAGGTTCTGGCATCCAGAAGACGATTCCACAAGCACCCAGTCATGA 1251 0.4269 MNQAQTQCSTGVKSPSARTELRESWLPINSTITRLVTFIIALSRIWRWDVTQFIHHFFVLGFLLDTELEAFLIYLQFNTKYYYVVGIGHTPRKFWFVTPPKVGPDVPYTFGLIGDLGQSYDSNMTLTHYELNPAKGKTVLFVGDLSYADRYPNYDNVRWDTWGRFTERSTAYQPWIWTAGNHEIDFAPEIGEFIPFKPYSHRYHVPYRASDSTAPFWYSIKRASAYIIVLSSYSAYGKYTPQFMWLEKELPKVNRSETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEPWFVQYKVDVVFAGHVHAYERSERVSNIAYNVINGICTPVNDQSAPVYITIGDGGNLEGLATNMTEPQPKYSAYREASFGHAIFDTKNRTHAQYSWHRNQDGYAVKADSLWFFNRFWHPEDDSTSTQS* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0015 416 Gene3D - 48 102 - -
Vvi3g0015 416 Gene3D - 103 412 IPR029052 -
Vvi3g0015 416 Pfam Iron/zinc purple acid phosphatase-like protein C 333 392 IPR025733 -
Vvi3g0015 416 CDD MPP_PAPs 104 402 IPR041792 -
Vvi3g0015 416 Pfam Calcineurin-like phosphoesterase 109 307 IPR004843 GO:0016787
Vvi3g0015 416 FunFam Fe(3+)-Zn(2+) purple acid phosphatase 103 411 - -
Vvi3g0015 416 PANTHER ACID PHOSPHATASE RELATED 73 401 IPR039331 GO:0003993
Vvi3g0015 416 SUPERFAMILY Purple acid phosphatase, N-terminal domain 70 100 IPR008963 GO:0003993|GO:0046872
Vvi3g0015 416 SUPERFAMILY Metallo-dependent phosphatases 104 410 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0015 Vvi-Chr3 205802 209020 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0015 61 390 Miscellaneous Gene Families AT1G13900 25.916 3.45e-17 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0015 K22390 - vvi:100241752 740.339