Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0014 ATGGGGGTGATGGGGCTATCTTTTTCTTCTGCAGTTGCTACTGTGGTTATTGTTTTGGGTTCGGTGTTGAATGCAGCAGTGGTGTGTCATGGAGGAATCACGAGTAGTTTTGTGAGGAAGGTTGAAAAAACCATTGATATGCCTCTTGACAGTGATGTCTTTCGTGTGCCTCTTGGTTATAATGCCCCTCAGCAGGTTCATATAACACAAGGAGATCATGAGGGGAGAGGAGTGATTGTCTCATGGGTCACTGTGGATGAACCAGGCTCAAACACAGTGCTCTACTGGAGTGAAAACTCCAAGCGCAAGAACAGAGCTGAGGGAATCATGGTTACCTATAAATTCTACAATTACACTTCTGGTTACATTCATCATTGCACTATCAAGAATTTGGAGTTCAACACCAAGTATTACTATGTGGTCGGGATTGGACACACTCCACGCAAGTTTTGGTTTGTAACTCCTCCTAAAGTTGGCCCAGATGTTCCATACACTTTTGGTCTTATAGGGGATCTTGGGCAGAGTTATGATTCAAATATGACACTTACGCACTATGAATTGAACCCTGCAAAGGGAAAAACCGTGTTGTTTGTTGGAGACCTTTCATATGCTGATAACTACCCGAACCATGATAACGTTAGGTGGGATACATGGGGAAGGTTCACTGAGAGAAGTACTGCTTATCAACCTTGGATATGGACTGCAGGAAACCATGAGATTGATTTTGTTCCTGAAATTGGTGAGTTTATACCCTTTAAGCCTTATAGTCATCGATATCATGTTCCCTACAGAGCATCAGATAGTACCGCTCCCTTCTGGTACTCTATCAAGAGGGCTTCTGCATATATCATTGTCTTGGCATCATACTCAGCATATGGAAAATATACTCCTCAGTATAAGTGGCTTGAAAAGGAGCTACCAAAAGTTAACAGGAGTGAGACACCATGGCTAATTGTTCTTATGCATTCCCCATGGTATAACAGTTACAACTATCATTATATGGAAGGGGAAACCATGAGAGTAATGTACGAGCCATGGTTTGTGCAGTACAAAGTTGATGTTGTGTTTGCTGGTCATGTTCATGCCTACGAACGATCTGAACGTGTGTCCAACATTGCTTATAACGTCATAAACGGCATTTGCACTCCTGTAAATGACCAGTCTGCACCAGTATACATCACCATTGGAGATGGGGGAAATCTCGAAGGCCTGGCAACCAACATGACAGAGCCACAGCCGAAGTACTCTGCTTATCGTGAAGCCAGTTTTGGACATGCCATTTTTGACATCAAGAACCGAACCCATGCTCACTATAGTTGGCACCGCAACCAAGATGGATATGCCGTGAAAGCTGATTCCTTATGGTTTTTCAACAGGTTCTGGCATCCAGAAGACGATTCCACAAGCACCCAGTCATGA 1419 0.4355 MGVMGLSFSSAVATVVIVLGSVLNAAVVCHGGITSSFVRKVEKTIDMPLDSDVFRVPLGYNAPQQVHITQGDHEGRGVIVSWVTVDEPGSNTVLYWSENSKRKNRAEGIMVTYKFYNYTSGYIHHCTIKNLEFNTKYYYVVGIGHTPRKFWFVTPPKVGPDVPYTFGLIGDLGQSYDSNMTLTHYELNPAKGKTVLFVGDLSYADNYPNHDNVRWDTWGRFTERSTAYQPWIWTAGNHEIDFVPEIGEFIPFKPYSHRYHVPYRASDSTAPFWYSIKRASAYIIVLASYSAYGKYTPQYKWLEKELPKVNRSETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEPWFVQYKVDVVFAGHVHAYERSERVSNIAYNVINGICTPVNDQSAPVYITIGDGGNLEGLATNMTEPQPKYSAYREASFGHAIFDIKNRTHAHYSWHRNQDGYAVKADSLWFFNRFWHPEDDSTSTQS* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0014 472 Gene3D - 62 158 - -
Vvi3g0014 472 Pfam Calcineurin-like phosphoesterase 165 363 IPR004843 GO:0016787
Vvi3g0014 472 Gene3D - 159 468 IPR029052 -
Vvi3g0014 472 Pfam Purple acid Phosphatase, N-terminal domain 63 145 IPR015914 GO:0003993|GO:0046872
Vvi3g0014 472 FunFam Fe(3+)-Zn(2+) purple acid phosphatase 62 158 - -
Vvi3g0014 472 CDD MPP_PAPs 160 458 IPR041792 -
Vvi3g0014 472 PANTHER ACID PHOSPHATASE RELATED 15 457 IPR039331 GO:0003993
Vvi3g0014 472 SUPERFAMILY Purple acid phosphatase, N-terminal domain 45 156 IPR008963 GO:0003993|GO:0046872
Vvi3g0014 472 Pfam Iron/zinc purple acid phosphatase-like protein C 389 448 IPR025733 -
Vvi3g0014 472 SUPERFAMILY Metallo-dependent phosphatases 160 466 IPR029052 -
Vvi3g0014 472 FunFam Fe(3+)-Zn(2+) purple acid phosphatase 159 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0014 Vvi-Chr3 174116 177841 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0014 121 446 Miscellaneous Gene Families AT1G13900 26.455 7.74e-20 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0014 K22390 - vvi:100246877 1006.13