Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0006 ATGGAGGGTATAACCCATCGAAGAATCCGTACATATGGGATTTGGATTCATGTAGCTGAGTTGGGAAAACTACCTCTTGTTCTCCTCATTCATGGCTTCCCTAAGCTATGGTCTTCATGGAATTACCAGATGACCCACTTGGCCAAGCATGGCTACCGCGTCGTCGCACCTGATATGCGAGGCTATAGAGACTTTGATTCTCCCCCTGATCTAGCTTCATACACCACACTCCACCTTGTTGGAGACCTAATTGGCCTTTTGGACCAGCTCGGAGAAGAAAAGGTAGTTCACCTCCTATATTGGAAAAACCTTTTCTATCATCTTCTTAGAAGCTCAAGCACAAGGTAA 348 0.4569 MEGITHRRIRTYGIWIHVAELGKLPLVLLIHGFPKLWSSWNYQMTHLAKHGYRVVAPDMRGYRDFDSPPDLASYTTLHLVGDLIGLLDQLGEEKVVHLLYWKNLFYHLLRSSSTR* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0006 115 SUPERFAMILY alpha/beta-Hydrolases 2 96 IPR029058 -
Vvi3g0006 115 PRINTS Epoxide hydrolase signature 51 66 IPR000639 GO:0003824
Vvi3g0006 115 PRINTS Epoxide hydrolase signature 31 49 IPR000639 GO:0003824
Vvi3g0006 115 Pfam alpha/beta hydrolase fold 25 96 IPR000073 -
Vvi3g0006 115 Gene3D alpha/beta hydrolase 1 100 IPR029058 -
Vvi3g0006 115 PANTHER EPOXIDE HYDROLASE 5 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0006 Vvi-Chr3 76147 76494 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0006 1 95 Acyl Lipid Metabolism Gene Families AT4G02340 55.789 1.85e-33 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0006 - - vvi:100259848 173.326