Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0005 ATGAACCAAATCATTGATTTTCTCAACACCCCATCAGAATTACCTCCATGGATTATTGAGAAGGAGCTTCAGTTTAGTGCCAGTAAGTTTCAACAATCTGGATTTACTGGGGCTTTGAACTACTACCGTGCCATGGACATGAATTGGGAGCTTCTAGGGGCATGGCAGGGAGTAAAAATTACTACACCAACGAAATTTATTGTTGGGGACGAGGACGTGGGATTTGAAGCATTTGGGAGAGGGGACTATATAAAGGGAAAAGCATTCAAGGGACTGGTACCTAACATGGAGGTTGTTGTGATTGGTGGCCATCATCACATCCAAATTGAGAAAGCTGAACGAGTTACTAGTGAAATTCTATCCTTCTTTGGTGAATGGTGA 381 0.4252 MNQIIDFLNTPSELPPWIIEKELQFSASKFQQSGFTGALNYYRAMDMNWELLGAWQGVKITTPTKFIVGDEDVGFEAFGRGDYIKGKAFKGLVPNMEVVVIGGHHHIQIEKAERVTSEILSFFGEW* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0005 126 SUPERFAMILY alpha/beta-Hydrolases 10 125 IPR029058 -
Vvi3g0005 126 Gene3D alpha/beta hydrolase 3 126 IPR029058 -
Vvi3g0005 126 PANTHER EPOXIDE HYDROLASE 9 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0005 Vvi-Chr3 69711 75526 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0005 2 125 Acyl Lipid Metabolism Gene Families AT3G51000 59.524 3.56e-48 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0005 - - vvi:100259848 226.483