Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0002 ATGGTTCATGAGTTGATAGGCATCCAGAATAATAAAGCAGATCTGAGAAACATTAGCAAGTTTCCTAAAGATCAGCAGGAGGTTGTACTATCATCTGAACTAGCTGTGTTCTTTAAAGCTAACATGCATGTTGGAGATATTGGAATGAATATCAAAAGAATGGTGGATGAATTTCAGCAAATTTCAAAAGGTAACCAGAACATTCAGACAATAGATTCTTGA 222 0.3514 MVHELIGIQNNKADLRNISKFPKDQQEVVLSSELAVFFKANMHVGDIGMNIKRMVDEFQQISKGNQNIQTIDS* 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0002 73 SUPERFAMILY Sec1/munc18-like (SM) proteins 1 72 IPR036045 -
Vvi3g0002 73 Gene3D Syntaxin Binding Protein 1; Chain A, domain 2 1 73 IPR043127 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0002 Vvi-Chr3 7116 7422 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0002 K12479 - vvi:100243832 117.472