Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g1151 ATGACAGTTTCGGAGGACGAAGACGAAAATCTTGCTCATTTCCTGGAATCCGAGGTCCTCTCTGAGGCCTCCGATCAGGAAAAAGACGCGGTTGCAGAGCAGCCACAAGCAAAGAGATTGCGCGTGGATGAGGAAGGAAGCAAGAGAAGTGCCCCCAAGAGGATAGAGACTGGCATCTTCAGCAAGATCCCCCCTGAACTTTTCCATCATATCCTCAAATTCCTCTCCTCCGAGGACCTTGTTGCATGCTCACTGGTTTGTCGATTCTTAAACTGTGCAGCATCTGATGAAAGCTTATGGCGTCGACTGTATTGTATGCGCTGGGGTCTGTTGCAGCCTACAAAAAAGTTTCGACAATGTGCTTGGAAAAAGCTGTATATTGAGCGTGATGAAGAAGACATGATTGAATTCGTGAGAAATTGCCCATCTGAGTTCAAGGAGTATTATATCCAAATGCAGGTAGCAAAGAGAAGCCAAGCACCTCTTCTGTCACAGGTAAATGATGACCGGATAATTCTTGACAAGACTGTTGCTGATCAAGTGTCTAGTTGGAAAAGTAGTCGAGGTCTGACTGATAAGGTGGACATCGACCATAACTGTTCTGGAGTAACTTGTACCTACTACCAAATTGGGGATGTATTTGTTTGTGAGAAGACCGGACGTGTTCATGTATGTGATGATACATGCAGAGAAGTTGTTACGGATACAGCCAATGATATTGTGGTTTGTACAATTTCTGGGCACTGTTTTGATAGATTACTGGTATCAGATGAGGAACCAGACATTCAACAAGGTGGGGTAACAGATGAAGCTGAACCATTCATGGGATCTGGCCGTTTTGCACGGGCGTATTTGCTAGGATACAACTGCGCTGATGAGAAGGAACTTGAAGCTGCTTTGAGGTTCTGCTGA 912 0.4529 MTVSEDEDENLAHFLESEVLSEASDQEKDAVAEQPQAKRLRVDEEGSKRSAPKRIETGIFSKIPPELFHHILKFLSSEDLVACSLVCRFLNCAASDESLWRRLYCMRWGLLQPTKKFRQCAWKKLYIERDEEDMIEFVRNCPSEFKEYYIQMQVAKRSQAPLLSQVNDDRIILDKTVADQVSSWKSSRGLTDKVDIDHNCSGVTCTYYQIGDVFVCEKTGRVHVCDDTCREVVTDTANDIVVCTISGHCFDRLLVSDEEPDIQQGGVTDEAEPFMGSGRFARAYLLGYNCADEKELEAALRFC* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g1151 303 SMART fbox_2 63 103 IPR001810 GO:0005515
Vvi2g1151 303 SUPERFAMILY F-box domain 50 129 IPR036047 GO:0005515
Vvi2g1151 303 CDD F-box_AtSKIP31-like 60 105 - -
Vvi2g1151 303 Pfam F-box-like 61 105 IPR001810 GO:0005515
Vvi2g1151 303 ProSiteProfiles F-box domain profile. 57 103 IPR001810 GO:0005515
Vvi2g1151 303 MobiDBLite consensus disorder prediction 19 50 - -
Vvi2g1151 303 Gene3D - 47 134 - -
Vvi2g1151 303 PANTHER F-BOX ONLY PROTEIN 3 4 301 - -
Vvi2g1151 303 FunFam F-box family protein-like 48 134 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g1151 - - vvi:100259709 617.846