Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g1139 ATGGAGAACCGAGAACAGGAGCATACACTGATTGAGTTGGGGGTTGTTGAAGCCCGCCAAGAACTGTTAAATGGAGGAGGAAGACAGCTTTACTTGAACAAGCTCTCGTCGCGAGAAATGGAGTCCCTCATTGCCATCAGTGACACCTTCTTGCCGTCCGTTGAGGCCCCTCACAACGCCGCCCATGCATACGTTGACAAGTTCTACCGGACTTCTGCCTCCATGGCTGGAACTCCACATATTGTTGGAGGGTTGATAAGTGAGAGGCTGGAACACCCAAAGTTATGGCTGAGTAGAGTGGTGTTATGGCTGCTGTCGACATGGTTTGGAACCTTCATAATATGTGGGTTGGCAAGCATGTCAAGCCATTTTCCATACTTCCAAAGCTTCCCTCAGGTGTCTCCCCATAAACGCCATGAAATAGTGTTGTCCTGGTCCCTCAGCTACTTCTCCCTCATCAGGATGCTCTTCAGATCCTTGAAGCTTGTCACTCTCCTTGTATTTTTCACCCAGGTAGATGAGAAGAATGAGAACCTGACATGGAAAGCTATTGGCTACTGTGGACCAGACCCAGATTTTAAAACCCTATATCGAGCCAACAAAACAGCACAACCAAATGGCTATGGAAGGTCAATATACCAGCGGGAACAAGAGGAAGAAGATGATAGAGAAGATTTCAATGGACCTCTTTACAGAGGCCTCATTAACGTAAAGCGTCCACGAGAAGTTGTTGCAGAAGCCCTAAGACTATCAGGATTTTCCATCTCAATTCATAGCCGAAAACATGAGACACCAAACTCATCTTCTCCTCTAATCATTCGTTGTGATGCAGTTGTCATTGGTTCCGGCTCCGGTGGTGGCGTTGCTGCAGGAGTTCTAGCAAAAGCAGGCTACAAAGTCCTTGTCTTAGAGAAAGGAAACTACTGCGCCAGGAGCAATCTTTCGCTTCTTGAAGGACCCACATTGGATCAAATGTACCTGTACGGAGGGATGTTAGCTACTGATGATACCGGGGTGATTATACTCGCGGGCTCTACTGTTGGTGGAGGGTCAACAATCAATTGGTCAGCTTCGATACGAACCCCTCAACATGTACGTAAGGAATGGTGTGATCAACATGAGCTGGAATTATTCGACAGCCAATTATACAAAGAAGCCATGGATGTTGTCTGTGAGAAAATGGGAGTTCAATCCGAAATTTATGAAGAAGGATTGAACAATGCAGTTTTGAGAAGAGGGTGTCAGGAATTGGGGTACCCAGTGACCGATATCCCCCGAAATTCGCAGCCCAAACACTACTGCGGTTGGTGTTGCTTTGGGTGCAAGGATGGGAGAAAGAAAGGCACTGCTGAGACGTGGCTAGTGGACATGATGAATTCCGGGAATGGTGTGATTCTCCCAGGGTGTGAAGCAATAAAAGTCCTGCACAATAGAAAGAAAGGAAGAGCTCGGAGTACAGCAACTGGGGTTGCTTTTGAATTCGAATACAAAGGCGTTAAAGAAGTATTCATGGTAGAGTCCAAGGTGACAATTGTGGCCTGTGGGGCTATTAGTACTCCAGGGCTCTTAAAGAGAAGTGGATTGAAGAACCCTAACATAGGCAAAAACCTGCATCTTCATCCTGTGGCAATGGCGTGGGGACACTTCCCTGAGCCGACGCCATTGTCACCAAGTCCTGGATGCCCAGGATTGGAGAAGAGGAGCTATGAAGGGGAAATAATGACAGTGATGTCCACTGTCGTCGCAGACTTTGAGGGCTCAGGATATGGTGCAGTTATCCAGACACCGTCTCTGCATCCGGGTATGTTCTCAGTCCTTATGCCATGGATTTCAGGCCCTGACATGAAAGATCGAATGATTCGGTATTCAAGAACTGCCCATATATTTGCACTGGCAAGGGACAAAGGGTCAGGAACCATATCGTCCCCGAGCACAATCAGCTACCAGATGGATGAAACTGATGAGGAGAATCTAAAGAGAGGGATGGAGAAGCTACTGAGGATACTAGCAGCAGCTGGTGCTGAAGAAATAGGAACTCATAACTGCAATGGGAGAAGCATAAATGTAAAGAAAGTGAGTTCACATGCATTTGAGAAGTTTGTGAAGGAGGAGAGCTCAAGGGCACTGAGAGACCTTTCAACACCAGTATGCTCAGCTCATCAAATGGGGAGTTGCAGAATGGGGGTTGATCCCAGGAGCTCAGCAGTGAATCAGATGGGGGAGACATGGGAAGTAGAGGGGCTTTATGTGGCTGATACAAGTGTGTTCCCAACTGCACTGGGTGTTAATCCAATGGTTACTGTCCAAGCCATCGCTTACTCCACTGCAAAATCTGTTGTTGAAGTTCTTAGGAGGAAGAAGAAAGAGACTTGTGCCAGCTAG 2382 0.4731 MENREQEHTLIELGVVEARQELLNGGGRQLYLNKLSSREMESLIAISDTFLPSVEAPHNAAHAYVDKFYRTSASMAGTPHIVGGLISERLEHPKLWLSRVVLWLLSTWFGTFIICGLASMSSHFPYFQSFPQVSPHKRHEIVLSWSLSYFSLIRMLFRSLKLVTLLVFFTQVDEKNENLTWKAIGYCGPDPDFKTLYRANKTAQPNGYGRSIYQREQEEEDDREDFNGPLYRGLINVKRPREVVAEALRLSGFSISIHSRKHETPNSSSPLIIRCDAVVIGSGSGGGVAAGVLAKAGYKVLVLEKGNYCARSNLSLLEGPTLDQMYLYGGMLATDDTGVIILAGSTVGGGSTINWSASIRTPQHVRKEWCDQHELELFDSQLYKEAMDVVCEKMGVQSEIYEEGLNNAVLRRGCQELGYPVTDIPRNSQPKHYCGWCCFGCKDGRKKGTAETWLVDMMNSGNGVILPGCEAIKVLHNRKKGRARSTATGVAFEFEYKGVKEVFMVESKVTIVACGAISTPGLLKRSGLKNPNIGKNLHLHPVAMAWGHFPEPTPLSPSPGCPGLEKRSYEGEIMTVMSTVVADFEGSGYGAVIQTPSLHPGMFSVLMPWISGPDMKDRMIRYSRTAHIFALARDKGSGTISSPSTISYQMDETDEENLKRGMEKLLRILAAAGAEEIGTHNCNGRSINVKKVSSHAFEKFVKEESSRALRDLSTPVCSAHQMGSCRMGVDPRSSAVNQMGETWEVEGLYVADTSVFPTALGVNPMVTVQAIAYSTAKSVVEVLRRKKKETCAS* 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g1139 793 Gene3D - 703 787 IPR036188 -
Vvi2g1139 793 Gene3D - 260 558 IPR036188 -
Vvi2g1139 793 Pfam GMC oxidoreductase 276 542 IPR000172 GO:0016614|GO:0050660
Vvi2g1139 793 PIRSF Lg_Ch_AO 24 789 IPR012400 GO:0046577
Vvi2g1139 793 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 32 788 - -
Vvi2g1139 793 Pfam GMC oxidoreductase 645 773 IPR007867 GO:0016614
Vvi2g1139 793 SUPERFAMILY FAD/NAD(P)-binding domain 273 780 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g1139 Vvi-Chr2 18133573 18139368 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g1139 11 783 Acyl Lipid Metabolism Gene Families AT4G19380 57.253 0.0 857
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g1139 K17756 - vvi:100261349 1563.13