Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g1127 ATGTCGCCTGGCTATCAATCTTGTGATATTGATTATTTCAATATCTCTGACATCACTCTCACTGGTTTACCAATTGAAGGGAGCGCTGGATTTCATGATATGGTAACAGGAATAACACCTTCCTTGATCCAGAGTCTAGGAGATGCTGCCTCTCTTGAAGATGCTGTGGGAACAAGTAACATCCATTCTGCAGAATTGTATGAAAAGCCATGGATGAATTCAGATGAAATATGTTTCCAGCTTCTTCAAGATGGAAGGCGCACCATATACATGCGACAAAGGCCTTTCCTCCCAATATTTTTTAGTAGAGTAGCAGAGATGTTTGAAATCATTGTTTTCACAGCCAATCAAAGCATTTATGCTGAACAATTACTTGATAAGATGGAAGGTGTTGGATACACCAATATTGCAGTCTATAGAAGCGTTGAAGAAGACATCACTTGA 444 0.3941 MSPGYQSCDIDYFNISDITLTGLPIEGSAGFHDMVTGITPSLIQSLGDAASLEDAVGTSNIHSAELYEKPWMNSDEICFQLLQDGRRTIYMRQRPFLPIFFSRVAEMFEIIVFTANQSIYAEQLLDKMEGVGYTNIAVYRSVEEDIT* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g1127 147 ProSiteProfiles FCP1 homology domain profile. 66 147 IPR004274 -
Vvi2g1127 147 Pfam NLI interacting factor-like phosphatase 82 130 IPR004274 -
Vvi2g1127 147 Gene3D - 58 146 IPR023214 -
Vvi2g1127 147 SUPERFAMILY HAD-like 69 140 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g1127 Vvi-Chr2 17868123 17868566 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g1127 K17616 - vvi:104877755 296.975