Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g1118 ATGCTACTCAAGGGAGGTGTTTTTGTGCTCCCTCGCTTCTCTCCTTCTTTCTCCATCTCAAGCAGGATTCGTTTGAGCAAAATGAGCACTGCAGCTGCACCGATAATCCCAAAATTCATTTCTGTGGAAGGGGTTGATATTAATTCAAGAAGTATCCCTGATGGCTTCAGATTCAGTCTTGTCTCTTATAACATTTTGGCACAGGTTTATGTGAAGAGTTCTCTGTTTCCGCACTCTCCATCCCCTTGTCTCAAGTGGAAAGCTCGTTCCCAGGCCATTTTGACCGTTCTGAGGAACCTTGGGGCTGACTTCCTCTGCCTACAGGAAGTAGATGAGTATGATAGCTTCTATAAAGGAAATATGGACAGCAATGGCTATTCAAGTATCTATGTTCAGAGAAGTGGGCAGAAACATGATGGTTGTGGGATTTTCTATAAGCACAATAGTGCAGAGCTGGTCCTTGAGGAGAAAATAGAATACAATGATCTTGTAGACTTGAATGATGATGGTTCATATAGCAATGATAGGCATTGTGATACACCAGCAAGTGCAAATAGTGATGCTGAACCAAAAAAAGGTTCATCACCACAGAACACTACAGAGGAGCGAGGGGATCCTAATGATCCTCGTGTGAGATTGAAGCGTGATTGTGTTGGAATCATGGCTGCATTCAGGCTTAAAGATCCTTCTCATCATCTTGTTATCGTGGCAAACACTCACCTTTATTGGGATCCAGAATGGGCTGATGTCAAGCTTGCGCAAGCTAAATATCTTCTGTCACGCTTAGCTCAATTTAAAACAGTAGTGTCAGACAAATTTGAATGTACGCCTTCTGTACTCGTAGCTGGTGATTTCAATTCAACCCCAGGGGATAAGGTCTACCAGTACCTTGTTTCGGGCAACTCGTCAGTGCCACAGCTGGAATGTTTGGACGGGCTTCCTATTCCCTTATGCAGCGTATACGATTTCACAAGAGGAGAACCACCATTCACAAACTGCACTCCTGACTTCACCAATACTCTTGATTATATATTCTTTTCCCCTTCTGGCCACATCAAACCAGTCAGCTTCCTTGAACTCCCGGAACCAGATTCTTCTGATGTAGCTGGTGGACTACCAAACCACCACCACCCAAGTGATCATCTACCAATTGGTGCTGAATTCAAAGTTACCGGGGAATAG 1182 0.4408 MLLKGGVFVLPRFSPSFSISSRIRLSKMSTAAAPIIPKFISVEGVDINSRSIPDGFRFSLVSYNILAQVYVKSSLFPHSPSPCLKWKARSQAILTVLRNLGADFLCLQEVDEYDSFYKGNMDSNGYSSIYVQRSGQKHDGCGIFYKHNSAELVLEEKIEYNDLVDLNDDGSYSNDRHCDTPASANSDAEPKKGSSPQNTTEERGDPNDPRVRLKRDCVGIMAAFRLKDPSHHLVIVANTHLYWDPEWADVKLAQAKYLLSRLAQFKTVVSDKFECTPSVLVAGDFNSTPGDKVYQYLVSGNSSVPQLECLDGLPIPLCSVYDFTRGEPPFTNCTPDFTNTLDYIFFSPSGHIKPVSFLELPEPDSSDVAGGLPNHHHPSDHLPIGAEFKVTGE* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g1118 393 Gene3D Endonuclease/exonuclease/phosphatase 38 393 IPR036691 -
Vvi2g1118 393 MobiDBLite consensus disorder prediction 174 211 - -
Vvi2g1118 393 SUPERFAMILY DNase I-like 57 389 IPR036691 -
Vvi2g1118 393 MobiDBLite consensus disorder prediction 176 202 - -
Vvi2g1118 393 Pfam Endonuclease/Exonuclease/phosphatase family 61 381 IPR005135 GO:0003824
Vvi2g1118 393 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 38 390 - -
Vvi2g1118 393 MobiDBLite consensus disorder prediction 364 385 - -
Vvi2g1118 393 FunFam Carbon catabolite repressor protein 4 homolog 4 36 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g1118 Vvi-Chr2 17687949 17713368 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g1118 K12603 - vvi:100256249 795.038