Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g1111 ATGGCTCCCAACACCAAGCCCAAAAGGGGCTTTCTCCCACCCCAAACAAGCCTCACAAGAATCCTTTTCTTCATTGTTCTCTTCACCATTTCAGCTCGTCTTGTCCTCCATGTCCCTTCCTCCATCTCCAACCCCTTCTCCTCCCATGTCAGACCGTGGACCGGTGACCTCCGTGGAGCTGAGTTCGCCTGGAACCGCCTGGAGCTGGGCGGGAGCCGTGCCCCACCCGTCGTCCTCAAGATCGCGGTCTTCTCAAGGAAATGGCCTATTGGCACAACCCCAGGTGGCATGGAGCGCCACGCCCAAACGCTGCACACAGCCTTATCCCGCCGCGGCCATCGCGTCCACATCTTCACCTCCCCGCCTGGAGACCAGAGAGGAGCAGCTGCTTTGCAAGAAATGAATATGCAATCTAACGGCAGCCCAACGTCCTCATCCCCGAGAATTCACTTCCATGAAGGGGAACCAGGGCGGTGGGCCTACAACAGGGCGTGGGAGCAGTTTCTGGAGGAGAACAGCCAGGTCCCCTTCGACGTAGTCCACTCAGAAAGCGTCGCGCTGCCTCACTCGCTGGCGAAAACTCTCCCCAATCTTGCGGTCTCATGGCACGGTATTGCCCTTGAGAGCTTAAGCTCATACATCTACCAAGACTTGGCCCTGCGTCCCCCCGGTGAGCCCATTTCTCCAGGCTTCAACAGGAGTGTCCAAGGGGTGATCCCAAAAGTTCTGAATGAAATAAGGTTCTTCCATAACTATGCCCACCATGTGGCCACAAGCGATAGCTCTGGGGAAGTTCTAAGGGATGTATACCAAATCCCCACCCAAAGAGTCCATGTGATTCTGAATGGAGTCGATGAGGAAGACTTCCGGCAGGACTTGCAGCTAGGTCACCAGTTCCGGTCCAGAATCGGGATCCCACAAAACGCTAGTTTAATACTAGGAGTTTCAGGGAGGCTAGTGAAGGACAAAGGGCATGCCATACTCCATGAGGCATTCTCCAGATTCATAAAACGACACCCAGATGCCTACTTGATTGTTGCAGGCTCAGGGCCATGGGAGAACAGGTACAAGGACTTGGGGCGCCAGGTATTAGTCTTGGGGTCCCTGAATCCTTCCCAACTTCGCGCCTTCTACAACTCGATCGACATCTTTGTGAACCCGACTCTTAGGCCCCAGGGGCTCGATATTACTCTAATGGAGGTGATGATGAGTGGGAAGGCTGTACTGGCATCAAGGTTTCCAAGCATCAAAGGCACAATTGTGGTTGATGATGAGTATGGGTTCATGTTTTCTCCAAATGTGGAGTCACTGTTGCAAGCAATGGAACAAGTGGTGAAAGAAGGGAGAAGCAGGTTAGCACAAAGGGGAAAGGCATGTAGGAGATATGCAGCCTCTATGTTTACTGCAACCAAGATGGCCTTAGCATATGAGAGGTTGTTTCTTTGTATAAAAAATGAAACGTTTTGTATGTACCCTTAA 1479 0.5254 MAPNTKPKRGFLPPQTSLTRILFFIVLFTISARLVLHVPSSISNPFSSHVRPWTGDLRGAEFAWNRLELGGSRAPPVVLKIAVFSRKWPIGTTPGGMERHAQTLHTALSRRGHRVHIFTSPPGDQRGAAALQEMNMQSNGSPTSSSPRIHFHEGEPGRWAYNRAWEQFLEENSQVPFDVVHSESVALPHSLAKTLPNLAVSWHGIALESLSSYIYQDLALRPPGEPISPGFNRSVQGVIPKVLNEIRFFHNYAHHVATSDSSGEVLRDVYQIPTQRVHVILNGVDEEDFRQDLQLGHQFRSRIGIPQNASLILGVSGRLVKDKGHAILHEAFSRFIKRHPDAYLIVAGSGPWENRYKDLGRQVLVLGSLNPSQLRAFYNSIDIFVNPTLRPQGLDITLMEVMMSGKAVLASRFPSIKGTIVVDDEYGFMFSPNVESLLQAMEQVVKEGRSRLAQRGKACRRYAASMFTATKMALAYERLFLCIKNETFCMYP* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g1111 492 PANTHER GLYCOSYLTRANSFERASE 19 492 - -
Vvi2g1111 492 Pfam Glycosyl transferases group 1 311 457 IPR001296 GO:0016757
Vvi2g1111 492 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 80 480 - -
Vvi2g1111 492 Gene3D Glycogen Phosphorylase B; 78 299 - -
Vvi2g1111 492 Gene3D Glycogen Phosphorylase B; 300 463 - -
Vvi2g1111 492 CDD GT4_PimA-like 80 480 - -
Vvi2g1111 492 Pfam Glycosyltransferase Family 4 95 287 IPR028098 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g1111 Vvi-Chr2 17582981 17584459 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g1111 1 492 Glycosyltransferase AT4G19460 59.646 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g1111 - - vvi:100247730 994.571