Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g1103 ATGGAAGGCTTCGGGGTGAAGATTTTCTTCAATGTTGTAGTAGTAGGGTTCTTGTTCCAACTCCTCGAGGTGGCTCTGGCCAGAGGCGGCGGCTTCAGTGTCGACCTCATCCACCGTGATTCCCCTCATTCTCCGTTCTTTGATCCTTCAAAGACTCAGGCGGAGCGGCTGACGGACGCGTTCCGCCGGTCTGTTTCTCGTGTCGGCCGCTTCAGGCCTACTGCCATGACCTCGGATGGAATTCAATCCAGGATAGTCCCGTCGGCCGGGGAATATCTCATGAATTTGTATATCGGAACTCCACCAGTTCCGGTCATCGCCATTGTTGATACCGGCAGTGATCTCACCTGGACGCAGTGCCGGCCCTGTACTCACTGTTACAAGCAGGTTGTCCCATTATTTGACCCCAAAAATTCATCAACTTACAGAGATTCTTCCTGTGGAACAAGCTTTTGTCTGGCTCTGGGGAAGGACCGCTCATGTAGCAAAGAAAAAAAATGCACATTCAGGTATTCCTACGCCGATGGCTCCTTTACCGGGGGAAACCTAGCATCGGAGACGCTCACTGTCGATTCCACCGCCGGAAAACCAGTAAGCTTTCCGGGATTCGCGTTCGGTTGTGGGCACAGCAGTGGTGGCATATTCGATAAAAGCAGCTCTGGGATAGTAGGCCTTGGAGGTGGGGAGTTGTCCCTGATTTCCCAGTTGAAATCCACCATAAACGGACTTTTTTCATACTGTTTGCTGCCTGTTTCCACCGATTCCAGCATCTCCAGCAGGATAAATTTTGGCGCATCCGGCAGAGTCTCCGGTTACGGCACCGTCTCCACTCCGCTAGTTCAGAAAAGCCCAGATACCTTCTACTACCTCACGTTAGAAGGCATCAGTGTGGGGAAGAAGAGGCTGCCATACAAGGGCTATTCGAAGAAGACTGAAGTTGAAGAGGGAAACATCATCGTTGATTCCGGGACAACCTATACCTTTCTCCCCCAGGAGTTTTACAGCAAGTTGGAGAAATCTGTAGCAAATTCCATTAAAGGGAAACGAGTCAGAGACCCAAATGGGATTTTCAGTCTGTGCTATAACACTACAGCTGAGATAAATGCTCCTATTATTACAGCTCATTTCAAGGATGCAAATGTGGAGTTGCAGCCATTGAACACATTCATGAGAATGCAGGAGGATCTGGTTTGCTTTACAGTGGCGCCTACTTCTGATATTGGGGTCTTGGGGAACTTGGCTCAGGTGAATTTCTTGGTAGGGTTTGATCTCAGGAAGAAGAGGATTTCATCCATGGAAGTCTTCGGGGTGAAGATTTTCTTCAATGTTGTAGTAGTAGGGTTCTTGTTCCACCTCTTGGAGGTGGGTCTGGCTAGCGGCGGAGGGTTCAGTGTCGACCTCATCCACCGCGATTCCCCTCATTCTCCGTTCTTTGATCCTTCAAAGACTCGGACTGAGCGGCTGACGGACGCTTTCCACCGGTCTGCTTCTCGTGTCGGCCGCTTCAGGCAAAGTGCCATGACCTCAGATGGAATTCAATCTAGGTTAGTCCCGTCGGCCGGGGAATATATCATGAATTTGTCTATCGGAACTCCACCAGTTCCTGTCATCGCCATTGTTGATACCGGCAGTGATCTCACCTGGACGCAGTGCCGGCCCTGTACCCACTGTTACAAGCAGGTTGTCCCATTCTTTGACCCCAAAAATTCATCAACTTACAGAGATTCTTCCTGTGGAACAAGCTTTTGTCTGGCTTTGGGGAATGATCGCTCATGTCGCAATGGAAAAAAATGCACATTCATGTACAGCTACGCCGATGGATCCTTTACTGGCGGAAACCTAGCAGTCGAAACGCTCACTGTCGCGTCCACCGCCGGAAAACCAGTAAGCTTTCCGGGGTTCGCGTTCGGCTGTGTGCACAGAAGTGGTGGCATATTCGATGAGCACAGCTCTGGGATTGTAGGCCTTGGAGTCGCGGAGTTGTCCATGATTTCTCAGTTGAAATCCACCATAAACGGCCGCTTTTCATACTGTTTGCTGCCTGTTTTCACCGATTCCAGCATGTCCAGCCGGATAAATTTTGGCAGATCAGGCATCGTCTCCGGCGCCGGCACCGTCTCCACTCCGCTTGTCATGAAAGGCCCAGATACCTACTACTACCTGATCACGTTAGAAGGCTTCAGTGTGGGGAAGAAGAGGCTGTCATACAAGGGTTTTTCGAAGAAGGCTGAAGTTGAAGAGGGAAACATTATCGTTGATTCGGGGACAACATATACCTATCTCCCCCTGGAGTTTTACGTCAAGTTGGAGGAATCTGTAGCACACTCCATTAAAGGGAAACGAGTCAGAGACCCGAATGGGATTTCCAGTCTGTGCTATAACACTACAGTTGATCAGATAGATGCTCCCATTATTACAGCTCATTTCAAGGATGCAAATGTGGAGTTGCAGCCATGGAACACATTCCTGAGAATGCAGGAAGATCTGGTTTGCTTTACAGTGTTGCCCACTTCTGATATTGGGATCTTGGGGAACTTGGCTCAGGTGAATTTCCTGGTAGGGTTTGATCTCAGGAAGAAGAGGGTCTCTTTCAAGGCTGCTGATTGCACCCTGCATTAG 2619 0.4971 MEGFGVKIFFNVVVVGFLFQLLEVALARGGGFSVDLIHRDSPHSPFFDPSKTQAERLTDAFRRSVSRVGRFRPTAMTSDGIQSRIVPSAGEYLMNLYIGTPPVPVIAIVDTGSDLTWTQCRPCTHCYKQVVPLFDPKNSSTYRDSSCGTSFCLALGKDRSCSKEKKCTFRYSYADGSFTGGNLASETLTVDSTAGKPVSFPGFAFGCGHSSGGIFDKSSSGIVGLGGGELSLISQLKSTINGLFSYCLLPVSTDSSISSRINFGASGRVSGYGTVSTPLVQKSPDTFYYLTLEGISVGKKRLPYKGYSKKTEVEEGNIIVDSGTTYTFLPQEFYSKLEKSVANSIKGKRVRDPNGIFSLCYNTTAEINAPIITAHFKDANVELQPLNTFMRMQEDLVCFTVAPTSDIGVLGNLAQVNFLVGFDLRKKRISSMEVFGVKIFFNVVVVGFLFHLLEVGLASGGGFSVDLIHRDSPHSPFFDPSKTRTERLTDAFHRSASRVGRFRQSAMTSDGIQSRLVPSAGEYIMNLSIGTPPVPVIAIVDTGSDLTWTQCRPCTHCYKQVVPFFDPKNSSTYRDSSCGTSFCLALGNDRSCRNGKKCTFMYSYADGSFTGGNLAVETLTVASTAGKPVSFPGFAFGCVHRSGGIFDEHSSGIVGLGVAELSMISQLKSTINGRFSYCLLPVFTDSSMSSRINFGRSGIVSGAGTVSTPLVMKGPDTYYYLITLEGFSVGKKRLSYKGFSKKAEVEEGNIIVDSGTTYTYLPLEFYVKLEESVAHSIKGKRVRDPNGISSLCYNTTVDQIDAPIITAHFKDANVELQPWNTFLRMQEDLVCFTVLPTSDIGILGNLAQVNFLVGFDLRKKRVSFKAADCTLH* 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g1103 872 SUPERFAMILY Acid proteases 85 430 IPR021109 -
Vvi2g1103 872 Gene3D Acid Proteases 503 695 IPR021109 -
Vvi2g1103 872 Gene3D Acid Proteases 74 263 IPR021109 -
Vvi2g1103 872 PANTHER OS07G0603500 PROTEIN-RELATED 34 430 - -
Vvi2g1103 872 ProSiteProfiles Peptidase family A1 domain profile. 523 865 IPR033121 -
Vvi2g1103 872 FunFam Eukaryotic aspartyl protease family protein 698 871 - -
Vvi2g1103 872 Pfam Xylanase inhibitor C-terminal 288 429 IPR032799 -
Vvi2g1103 872 Pfam Xylanase inhibitor C-terminal 720 865 IPR032799 -
Vvi2g1103 872 Gene3D Acid Proteases 264 436 IPR021109 -
Vvi2g1103 872 Gene3D Acid Proteases 702 871 IPR021109 -
Vvi2g1103 872 CDD pepsin_A_like_plant 91 430 IPR034161 -
Vvi2g1103 872 ProSiteProfiles Peptidase family A1 domain profile. 92 432 IPR033121 -
Vvi2g1103 872 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 107 118 IPR001969 GO:0004190|GO:0006508
Vvi2g1103 872 CDD pepsin_A_like_plant 522 869 IPR034161 -
Vvi2g1103 872 Pfam Xylanase inhibitor N-terminal 523 695 IPR032861 -
Vvi2g1103 872 Pfam Xylanase inhibitor N-terminal 92 264 IPR032861 -
Vvi2g1103 872 FunFam Eukaryotic aspartyl protease family protein 267 437 - -
Vvi2g1103 872 SUPERFAMILY Acid proteases 517 869 IPR021109 -
Vvi2g1103 872 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 318 329 IPR001969 GO:0004190|GO:0006508
Vvi2g1103 872 FunFam Probable aspartic protease At2g35615 502 695 - -
Vvi2g1103 872 FunFam Probable aspartic protease At2g35615 72 264 - -
Vvi2g1103 872 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 538 549 IPR001969 GO:0004190|GO:0006508
Vvi2g1103 872 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 750 761 IPR001969 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g1103 Vvi-Chr2 17439361 17448268 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g1103 500 869 Miscellaneous Gene Families AT1G77480 24.396 3.93e-21 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g1103 - - vvi:100263031 893.649