Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g1092 ATGTTTGAAACGAAACCGGATTCGTTTCGTCGGAACCTGTCGAAGAAGCGCTCATTTAGGGCTGCGGTGGGCGGGGACGACCGGGGGTGGACTCTGCTGCATGTTGGTGCTCGGAAAGGGGATCTCAATGAGGTGAGGCGACTTCTTGATGAAGGAATGGATGTAAACGTGGCAGCATGCGGCCCCAAATCGAAAGGGGTGACCCCCCTTCACCTTGCCGCTCAGGGTGGGCATCTCAGAGTCATGGATGAATTGCTTGAACGTGGTGCTAATATTGATGCTAGAACTAAGGGTGCCTGTGGCTGGACCCCACTTCACAATGCAGCCAAAGAAAGAAACAAGGATGCCATCAAATTCCTGATAGAGAATGGGGCATTCCTAGCTGCTGACATCAATGATAACAGGTTCAACCCACCCCTCCATTACTGCACAGGTCTTGAGTGGGCTTATGAGGAGATGAAACGCATCCAACAAGAGAATTGGAGCTCATCAGCAGGTGAGACCTCCTACAGCTCTGAAAGCTAA 525 0.5162 MFETKPDSFRRNLSKKRSFRAAVGGDDRGWTLLHVGARKGDLNEVRRLLDEGMDVNVAACGPKSKGVTPLHLAAQGGHLRVMDELLERGANIDARTKGACGWTPLHNAAKERNKDAIKFLIENGAFLAADINDNRFNPPLHYCTGLEWAYEEMKRIQQENWSSSAGETSYSSES* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g1092 174 Pfam Ankyrin repeats (many copies) 68 121 IPR002110 GO:0005515
Vvi2g1092 174 PRINTS Ankyrin repeat signature 66 81 IPR002110 GO:0005515
Vvi2g1092 174 PRINTS Ankyrin repeat signature 116 130 IPR002110 GO:0005515
Vvi2g1092 174 ProSiteProfiles Ankyrin repeat region circular profile. 28 57 - -
Vvi2g1092 174 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 26 144 - -
Vvi2g1092 174 SMART ANK_2a 28 57 IPR002110 GO:0005515
Vvi2g1092 174 SMART ANK_2a 65 94 IPR002110 GO:0005515
Vvi2g1092 174 SMART ANK_2a 100 133 IPR002110 GO:0005515
Vvi2g1092 174 ProSiteProfiles Ankyrin repeat region circular profile. 100 125 - -
Vvi2g1092 174 Pfam Ankyrin repeat 29 57 IPR002110 GO:0005515
Vvi2g1092 174 ProSiteProfiles Ankyrin repeat region circular profile. 65 97 - -
Vvi2g1092 174 SUPERFAMILY Ankyrin repeat 26 144 IPR036770 -
Vvi2g1092 174 ProSiteProfiles Ankyrin repeat profile. 100 125 IPR002110 GO:0005515
Vvi2g1092 174 Gene3D - 15 169 IPR036770 -
Vvi2g1092 174 ProSiteProfiles Ankyrin repeat profile. 65 97 IPR002110 GO:0005515
Vvi2g1092 174 ProSiteProfiles Ankyrin repeat profile. 28 60 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g1092 26 144 Miscellaneous Gene Families AT5G02620 35.000 1.06e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g1092 - - vvi:100266568 338.191