Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g1088 ATGGCAGAATATGAAGGAAAGGTGGTCCCTGCAGATTTCACTTCAGGAAATATGCTTTTTAAACCTATCCTGGAGGAAGGAGTTTTCCTGTTTGATTGTTCTTCAGATGATAGAGATGCGGCATTTCCCAGTCTTTCATTTACTAATCAGAAAAATAGGGATACACCAATCATGAATCACAAGGTTCCTATGTATACCCCTACATTTGAATGTGTTTCAGGGAAACAGATTGTTACAATTGAGCTTCCCACTGGCACCTCCTTTTATGGAACAGGAGAAGTTAGCGGACAGCTTGAGCGGACAGGGAAAAGGGTTTTTACGTGGAACATAGCTGCATGGGGTTTTGATTCTGGAACGACATCCTTGTACCAGTCACATCCTTGGGTTCTAGCTGTTCTTCCAAATGGGGAGGCACTTGGGATTCTTGCTGATACAATGCGGTGCTGTGAGGTTGATTTGCAGAAAGAATGGACAGTAAAGTTTATTGCTTCATCCTCATATCTCGTCATCACATTTGGTCCATTTGCTTCACCAAATGCTGTTTTGATATCTTTATCCAATGCAATTGGAACTATATTTATGCCCCCAAAATGGTCCTTAGGCTATCAGCAATGCCGATGGAGCTATGATTCTGCTGTGAGAGTACTCGAGGTTGCCCGAACATTCCGTGAGAAGGGAATACCTTGTGATGTCATATGGATGGATATTGATTACATGGATGGTTTTCGCTGTTTCACTTTTGATCAGGCAAGCTATATATCCCCTATAAGATATTTATGA 780 0.4179 MAEYEGKVVPADFTSGNMLFKPILEEGVFLFDCSSDDRDAAFPSLSFTNQKNRDTPIMNHKVPMYTPTFECVSGKQIVTIELPTGTSFYGTGEVSGQLERTGKRVFTWNIAAWGFDSGTTSLYQSHPWVLAVLPNGEALGILADTMRCCEVDLQKEWTVKFIASSSYLVITFGPFASPNAVLISLSNAIGTIFMPPKWSLGYQQCRWSYDSAVRVLEVARTFREKGIPCDVIWMDIDYMDGFRCFTFDQASYISPIRYL* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g1088 259 PANTHER ALPHA-GLUCOSIDASE 79 252 - -
Vvi2g1088 259 Gene3D glycosyl hydrolase (family 31) 40 174 - -
Vvi2g1088 259 SUPERFAMILY (Trans)glycosidases 187 248 IPR017853 -
Vvi2g1088 259 Pfam Galactose mutarotase-like 86 152 IPR025887 -
Vvi2g1088 259 Gene3D Glycosidases 179 259 - -
Vvi2g1088 259 Pfam Glycosyl hydrolases family 31 177 255 IPR000322 GO:0004553|GO:0005975
Vvi2g1088 259 CDD GH31_N 78 190 - -
Vvi2g1088 259 SUPERFAMILY Galactose mutarotase-like 73 158 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g1088 Vvi-Chr2 17133923 17139180 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g1088 12 255 Glycoside Hydrolase AT3G23640 68.443 2.48e-119 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g1088 - - vvi:100254505 478.018