Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g1087 ATGTCTTGGATAATAAACTACATTAATTCCCCCCAGGAGCGTTTCTCGGATCCAAAATCTTTGGTCAAGGATCTTCATCTTAATGGTTTCAAAGCGATCTGGATGCTTGACCCAGGGATCAAACAAGAAGATGGTTACTTTGTTTATGATAGTGATTCTGCAAATGATGTCTGGATACATAAAGCAGATGGAACACCTTTTGTTGTATGGCCCGGTCCTTGTGTTTTCCCTGACTTTACTCAGTCAAAAGCTCGTTCATGGTGGGCCTGTTTAGTCAAAGATTTTATTTCTAATGGTGTTGATGGTATATGGAACGATATGAATGAGCCAACTGTTTTTAAGGCTGTAACAAAGTCAATGCCTGAGGACAATGTTCATAGAGGAGATGCTGAGCTTGGAGGTTGTCAGAATCACTCACACTGTCACAATGTCTATGGCATGCTGATGGCAAGATCAACATATGAAGGAATGAAATTAGCTAATGAAAATAAGCGTCCTTTTGTTCTCACCAGAGCTGGGTTTATAGGTAGCCAAAGATATGCAGCAACATGGACAGGAGATAACCTTTCAAACTGGGATCACCTCCATATGAGTATCCCTATGGTGCTTCAATTGGGGCTCAGTGGTCAACCATTATCAGGACCAGACATTGGTGGATTCGGTAGAAATGCGACACCCAGGCTGTTTGGAAGGTGGATGGGTGTGGGTGCTATGTTTCCTTTTTGTCGTGGGCATTCTGAAACTGACACAATTGACCATGAACCCTGGTCTTTTGGGGAAGAGCCCTTCAAAACAAGGGCTTGA 804 0.4291 MSWIINYINSPQERFSDPKSLVKDLHLNGFKAIWMLDPGIKQEDGYFVYDSDSANDVWIHKADGTPFVVWPGPCVFPDFTQSKARSWWACLVKDFISNGVDGIWNDMNEPTVFKAVTKSMPEDNVHRGDAELGGCQNHSHCHNVYGMLMARSTYEGMKLANENKRPFVLTRAGFIGSQRYAATWTGDNLSNWDHLHMSIPMVLQLGLSGQPLSGPDIGGFGRNATPRLFGRWMGVGAMFPFCRGHSETDTIDHEPWSFGEEPFKTRA* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g1087 267 Gene3D Glycosidases 2 266 - -
Vvi2g1087 267 ProSitePatterns Glycosyl hydrolases family 31 active site. 102 109 IPR030458 -
Vvi2g1087 267 Pfam Glycosyl hydrolases family 31 12 261 IPR000322 GO:0004553|GO:0005975
Vvi2g1087 267 SUPERFAMILY (Trans)glycosidases 3 262 IPR017853 -
Vvi2g1087 267 PANTHER ALPHA-GLUCOSIDASE 12 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g1087 Vvi-Chr2 17126803 17131472 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g1087 12 261 Glycoside Hydrolase AT3G23640 84.127 6.58e-154 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g1087 - - vvi:100254505 506.908