Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g1086 ATGCGGTGGGATATAGTTTGCCTTGACAAGAGGAAAGGGAGCTTGGGAGTGAAGAGTCTTTCCACTCTCAATGAGGCTCTTCTGATCAAGTGGAGTTGGCGCTATGCTATTGAACAAGAGGTCCTTTGGAAGTGTGTTATTAGTGGGAAGTATGGGGAAGAAGAAGGGGGTTGGTGCTTTAGGGAGTGTGAAGAAGTTTGCCGTTTGGCATTGAAGAGGCGGTACCGCTTGATACCACACATATATACTCTGTTTTATGTGGCACATATAACCGGCACTCCAGTGGCAACTCCCACCTTTTTTGCAGATCCAAAGGATCCCAGCTTGAGGACAGTTGAGAACTCCTTTCTCTTGGGACCACTTCTAATATATGCAAGGATTTACCAGCTCTATAGTTGCAAGGTGGATGAACATGGGAAAGCTGAAGGTGTTCTCTTTGAAGATGATGGTGATGGATATGAATTCACAAAAGGTGGATATCTATTGACATACTATGTTGCTGAACTTCAATCTTCAGTTGTTTCTGTTAGAGTTTCCAAAACTGAAGGATCATGGAAGAGACCAAAGCGTTGTCTTCATGTCCAATTATTGCTCGGTGGAGGTGCGAAGATTGATGCACGAGGCACTGATGGAGAGGTTTTACAAATTACGATGCCTTCAGAACATGAAGTGTCTGACCTGGTATCTACAAGCAAGGAACGATACAGGAATTGTCTAGAAAGTGCTAAGCTTATTCCAGATGTACAAGAGGTTTCTGGCCACAAGGGAATAGAACTTTCAAGTACTCCTATTGAACTGAAAAGTAGTGATTGGGCTCTCAAAGTGGTCCCTTGGATTGGGGGTAGAATTATTTCCATGATGCATCTTCCTTCCGGAACTCAATGGCTTCATAGCAAGATTGAAGCTAATGGATATGGAGAATATAGTGGTGTTGAGTACTGGTCAGCTGGATGGTCTGAGGAATATACCATTGTTGAGCGTAATCTTGAGCAGGCAGGAGAGGAGGAATCACTTAAGTTGGAAGGTGAAATTGATGGAGGATTAGTTATTGAGCGGCAAATATCCCTGCCAAAAGATAATTCCAAGGTTTTCCGAGTAGATTCTGGCATTATAGCCCGTAACGTTGGCGCTGGCTCTGGTGGATATTCAAGGCTCGTTTGCCTCCGTGTGCACCCGATATTCAATCTCTTGCACCCTACGGAGTCTTTTGTCTTGTTTGTCTCCATCGATGGATCTAAGCACGAAGTTTGGCCTGAAGCCAGTGAGCAGTCTTATGAAGGGAATCTTCGGCCTAATGGTGAATGGATGCTGGTCGATAAATGTCTCAGGCTGGCTCTAGTGAACTGGTTTGATATCACTGAAGTCCACAAGTGTCTCATTCACTGGGGAACCAGGACAGTTAATTTAGAGCTGTGGTCGGAACAGAGACTGGTTTCCAAGCAATCACCTCTAACGATCTCACATGAACATGAGGTGAGAGCAATTCCATAG 1491 0.446 MRWDIVCLDKRKGSLGVKSLSTLNEALLIKWSWRYAIEQEVLWKCVISGKYGEEEGGWCFRECEEVCRLALKRRYRLIPHIYTLFYVAHITGTPVATPTFFADPKDPSLRTVENSFLLGPLLIYARIYQLYSCKVDEHGKAEGVLFEDDGDGYEFTKGGYLLTYYVAELQSSVVSVRVSKTEGSWKRPKRCLHVQLLLGGGAKIDARGTDGEVLQITMPSEHEVSDLVSTSKERYRNCLESAKLIPDVQEVSGHKGIELSSTPIELKSSDWALKVVPWIGGRIISMMHLPSGTQWLHSKIEANGYGEYSGVEYWSAGWSEEYTIVERNLEQAGEEESLKLEGEIDGGLVIERQISLPKDNSKVFRVDSGIIARNVGAGSGGYSRLVCLRVHPIFNLLHPTESFVLFVSIDGSKHEVWPEASEQSYEGNLRPNGEWMLVDKCLRLALVNWFDITEVHKCLIHWGTRTVNLELWSEQRLVSKQSPLTISHEHEVRAIP* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g1086 496 Pfam Glycosyl hydrolases family 31 58 128 IPR000322 GO:0004553|GO:0005975
Vvi2g1086 496 PANTHER ALPHA-GLUCOSIDASE 58 128 - -
Vvi2g1086 496 Gene3D Glycosidases 43 122 - -
Vvi2g1086 496 Pfam Domain of unknown function (DUF5110) 129 196 IPR033403 -
Vvi2g1086 496 Gene3D - 123 240 IPR013780 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g1086 Vvi-Chr2 17073807 17102360 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g1086 58 496 Glycoside Hydrolase AT3G23640 55.332 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g1086 - - vvi:100254505 682.945