Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g1085 ATGCATGACGATTGCCCTGGTCATTGGTATCTGTGCATCATTGACTTCAAGCACTTTGATATCCAAATTTTGGATTCATTACGATCGAAGAGTCGGGACGAGTTCCGGTTTAAGAGTGTCAAAATAATGGTTGAATTTTGTCAAACGTTCTTCAAACTGTATGACATAGGGAAAGATGTCTTCCAATTCTCCATTGATTGGGCTCCTTCGATTCCGACCCAAGATAATGGTGGGACTGTGGAGTGCATGTCATTAGACATATGCAGAGATTCAAAAATGGTGATTTGA 288 0.4062 MHDDCPGHWYLCIIDFKHFDIQILDSLRSKSRDEFRFKSVKIMVEFCQTFFKLYDIGKDVFQFSIDWAPSIPTQDNGGTVECMSLDICRDSKMVI* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g1085 95 Gene3D Adenoviral Proteinase; Chain A 1 86 - -
Vvi2g1085 95 SUPERFAMILY Cysteine proteinases 7 77 IPR038765 -
Vvi2g1085 95 Pfam Ulp1 protease family, C-terminal catalytic domain 1 78 IPR003653 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g1085 Vvi-Chr2 17064914 17065384 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g1085 - K08592 vvi:104878855 165.622