Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g1084 ATGGCAAGTCCATATTGTATGTGCCATCTTGAATGCAACATTGAAGAAATTGCTGATAAAGATGAACCCCCACCAAAAAGTTCCAAAAGTAAAAAGAAAAATGGACTAGAGAAATCACCCAGTCTTGTCTTCAAAATAACAAGCAAAGTTCCATATAAGACAGTGTTGAAAGCTCACAGTGCTGTTGTGTTAAAGGCTGAGAGCGCAGCGGATAAGGCTGAGTGGTTAAACAAATTGAGAAATGTTATTCAGCCTTCAGGTCAAGTGAAGGGTGAATTTGGTCTTACCATGCGGCAAAGTCTTTTTGATGGTTCTCTTGCAGTTGTCCTTTGCCAAGTAGAAAAATCCAAGGAAGATATGCTTAATCAGTTATACAGTTCTGTCAGTGCCCAAAGCACTGCAAGGATTGAAGAACTACTTCAGGAGGTTCAGAATGTGAAACGAAGGAGGGAGCGTAACCAGAAACAGTCCTCTCTTCTTGTAAAGCTCACAAAGCAGCTTAGCATCCATGACAACCGTGCAGCTGCTGCTTCTAGCTGCTGGTCCAATGGTGGTGCA 558 0.4229 MASPYCMCHLECNIEEIADKDEPPPKSSKSKKKNGLEKSPSLVFKITSKVPYKTVLKAHSAVVLKAESAADKAEWLNKLRNVIQPSGQVKGEFGLTMRQSLFDGSLAVVLCQVEKSKEDMLNQLYSSVSAQSTARIEELLQEVQNVKRRRERNQKQSSLLVKLTKQLSIHDNRAAAASSCWSNGGA 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g1084 186 Gene3D - 3 85 IPR011993 -
Vvi2g1084 186 Pfam Dynamin GTPase effector domain 106 162 IPR003130 GO:0003924|GO:0005525
Vvi2g1084 186 ProSiteProfiles PH domain profile. 1 84 IPR001849 -
Vvi2g1084 186 Coils Coil 129 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g1084 Vvi-Chr2 17046955 17049219 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g1084 K01528 - vvi:100245514 283.493