Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g1083 ATGGCAGGAGCATTGACATTCAGCAGTGACGGAGTGGGAGCATTGGGATTTTGGAAAACCCACCAATATGGGTTTATTTCTGGGGGTTTCAACAGGCCATTGTTGAAGAATTGTGTTCCTCGGCACCCATCTTCTCCATCTCGCCCCTTCAGAAAGAGGGTTAAGAAGAGGCTGATTGGTGAAAGATTAGTGATCAAGATGGCAGAATATGAAGGAAAGGTGGTCCCTGCAGATTTCACTTCTGGAAATATGCTTTTTGAACCTATCCTGGAGGAAGGGGTTTTCCGGTTTGATTGTTCTTCAGATGATAGAGATGCAGCATTTCCCAGTCTTTCATTTACTAATCAGAAAAATAGAGATATGCCAATCATGAATCACAAGGTTCCTATGTATACCCCTACATTTGAATGTGTTTTGGGGCAACAGATTGTTACAATTGAGCTTCCCACTGGTACCTCCTTTTATGGAACAGGAGAAGTTAGTGGACAGCTTGAGCGGACAGGGAAGAGAGTTTTTACGTGGAACACAGATGCATGGGGTTATGGTTCTGGAACAACATCCTTGTACCAGTCACATCCTTGGGTTCTAGCTGTTCTTCCAAATGGGGAGGCACTTGGGATTCTTGCTGATACAACACGGCGCTGCGAGATTGATTTGCAGAAAGAATCAATAGTAAAGTTTAGTGCTTCATCCTCTTATCCCATCATCACATTTGGTCCATTTGCTTCACCAACTGCAGTTTTGACATCTTTATCACATGCAATTGGAACTGTATTTATGCCCCCAAAGTGGTCCTTAGGCTATCAGCAATGCCGATGGAGCTATGATTCTGCTGTGAGAGTTCTTGAGGTTGCCCGAACATTCCGTGAGAAGGGAATACCTTGTGATGTCATATGGATGGATATTGATTACATGGATGGTTTTCGCTGTTTCACTTTTGATCAGGAGCGTTTCTCAGATCCAAAATCTTTGGGTAAGGATCTTCATCTTAATGGTTTCAAAGCAATCTGGATGCTTGACCCAGGGATCAAACAAGAAGATGGTTACTTTGTTTATGATAGTGGTTCTGCAAATGATGTCTGGATTCATAAAGCAGATGGAACACCTTTTGTTGGGAAAGTATGGCCCGGTCCTTGTGTTTTCCCTGACTTTACCCAGTCAAAAGCTCGTTCATGGTGGGCCTGTTTAGTCAAAGATTTTATTTCTAATGGTGTTGATGGTATATGGAATGATATGAATGAACCAGCTGTTTTTAAGACTGTAACAAAGACAATGCCTGAGGACAATGTTCATAGAGGAGATGCTGAGCTTGGAGGTTGTCAGAATCACTCACACTATCACAATGTCTATGGCATGCTGATGGCAAGATCAACATATGAAGGAATGAAATTAGCTAATGAAAATAAGCGTCCTTTTGTTCTCACTAGAGCTGGGTATATCGGTAGCCAGAGATATGCAGCAACATGGACAGGAGATAACCTTTCAAACTGGGATCACCTCCATATGAGTATCTCTATGGTGCTTCAATTGGGGCTTAGTGGTCAACCACTATCAGGACCAGACATTGGTGGATTTGCTGGAAATGCAACACCCAGGCTATTTGGAAGGTGGATGGGTGTGGGTGCTATGTTTCCTTTTTGTCGCGGGCATTCTGAAACTGGCACAGTTGACCATGAACCCTGGTCTTTTGGGGAAGAGTGTGAAGAAGTTTGCCGTTTGGCATTGAAAAGGCGGTACCGCTTGATACCACACATATATACTCTGTTTTATATGGCACATACAACTGGTACTCCAGTGGCAACTCCCACCTTTTTTGCAGATCCAAAGGATCCCAGCTTGAGGACAGTTGAGAACTCCTTTCTCATGGGACCCCTTCTAATATATGCAAGCACTATACCTGACCAGGGATTGGATGAATTACAGCACAAATTACCCAAAGGCATTTGGCTGAGCTTTGATTTTGATGATTCACATCCGGATTTACCAGCTCTATATTTGCAAGGTGGATCGATCATTCCTTTGGGTCCTCCCCATCAGCATGTTGGTGAAGCTGATCCAACAGATGACTTAATACTCCTTGTCGCTCTAGATGAACATGGGAAAGCTGAAGGTGTTCTCTTTGAAGATGATGGTGATGGGTATGAATTCACAACAGGTGGATATCTATTGACATACTATGTTGCTGAACTTCAATCTTCAGTTGTTTCTGTTAGAGTTTCCAAAACTGAAGGATCATGGAAAAGGCCAAAGCGTGGTCTTCATGTCCAATTATTGCTTGGTGGAGGTGCAAAGATTGATGCACAAGGCACTGATGGAGAGGTTTTACAAATTACGATGCCTTCAGAACATGAAGTGTCTGACCTGGTATCTACAAGCAAGGAACAATACAGGAATCGTCTAGAAAGTGCTAAGCATATTCCAGATGTACAAGAGGTTTCTGGCCATAAGGGAATAGAACTTTCAAGTACTCCTATTGAACTGAAAAGTGGTGATTGGGCTCTCAAAGTGGTCCCTTGGATTGGGGGTAGAATTATTTCCATGATGCATCTTCCTTCTGGAACTCAGTGGCTTCATAGCAGGATTGAAGCTAATGGATATGAAGAATACAGTGGTGTTGAGTACCGGTCAGCTGGATGGTCTGAGGAATATACCATTGTTGAGCGTAATCTTGAGCAGGCAGGAGAGGAGGAATCACTTAAGTTAGAAGGTGAAATTGGTGGAGGATTAGTTATTGAGCGGCAAATATCCCTGCCAAAAGATAATTCCAAGGTTTTCCGAGTAGATTCTGGCATTATAGCCCATAATGTTGGTGCTGGCTCTGGTGGATATTCAAGGCTGGTTTGCCTCCGTGTGCACCCAATGTTCAATCTCTTGCACCCAACAGAATCTTTTGTCTCGTTTGTCTCCATTGATGGATCTAAGCATGAAGTTTGGCCTGAAGCTGGTGAGCAGTCTTATGAAGGGAATCTTCGGCCTAATGGTGAATGGATGCTGGTTGATAAATGTCTCGGGCTGGCTCTAGTGAACCGGTTCGACATCACTGAAGTCCACAAGTGTCTCGTTCACTGGGGAACCGGAACAGTTAACTTAGAGCTGTGGTCAGAACAGAGACCGGTTTCCAAGCAATCACCTCTTACGATCTCCCATGAATATGAGGTGAGAGTGATCCCTTAG 3174 0.4367 MAGALTFSSDGVGALGFWKTHQYGFISGGFNRPLLKNCVPRHPSSPSRPFRKRVKKRLIGERLVIKMAEYEGKVVPADFTSGNMLFEPILEEGVFRFDCSSDDRDAAFPSLSFTNQKNRDMPIMNHKVPMYTPTFECVLGQQIVTIELPTGTSFYGTGEVSGQLERTGKRVFTWNTDAWGYGSGTTSLYQSHPWVLAVLPNGEALGILADTTRRCEIDLQKESIVKFSASSSYPIITFGPFASPTAVLTSLSHAIGTVFMPPKWSLGYQQCRWSYDSAVRVLEVARTFREKGIPCDVIWMDIDYMDGFRCFTFDQERFSDPKSLGKDLHLNGFKAIWMLDPGIKQEDGYFVYDSGSANDVWIHKADGTPFVGKVWPGPCVFPDFTQSKARSWWACLVKDFISNGVDGIWNDMNEPAVFKTVTKTMPEDNVHRGDAELGGCQNHSHYHNVYGMLMARSTYEGMKLANENKRPFVLTRAGYIGSQRYAATWTGDNLSNWDHLHMSISMVLQLGLSGQPLSGPDIGGFAGNATPRLFGRWMGVGAMFPFCRGHSETGTVDHEPWSFGEECEEVCRLALKRRYRLIPHIYTLFYMAHTTGTPVATPTFFADPKDPSLRTVENSFLMGPLLIYASTIPDQGLDELQHKLPKGIWLSFDFDDSHPDLPALYLQGGSIIPLGPPHQHVGEADPTDDLILLVALDEHGKAEGVLFEDDGDGYEFTTGGYLLTYYVAELQSSVVSVRVSKTEGSWKRPKRGLHVQLLLGGGAKIDAQGTDGEVLQITMPSEHEVSDLVSTSKEQYRNRLESAKHIPDVQEVSGHKGIELSSTPIELKSGDWALKVVPWIGGRIISMMHLPSGTQWLHSRIEANGYEEYSGVEYRSAGWSEEYTIVERNLEQAGEEESLKLEGEIGGGLVIERQISLPKDNSKVFRVDSGIIAHNVGAGSGGYSRLVCLRVHPMFNLLHPTESFVSFVSIDGSKHEVWPEAGEQSYEGNLRPNGEWMLVDKCLGLALVNRFDITEVHKCLVHWGTGTVNLELWSEQRPVSKQSPLTISHEYEVRVIP* 1058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g1083 1057 PANTHER ALPHA-GLUCOSIDASE 147 737 - -
Vvi2g1083 1057 CDD GH31_glucosidase_II_MalA 256 596 - -
Vvi2g1083 1057 Gene3D Glycosidases 259 580 - -
Vvi2g1083 1057 Pfam Domain of unknown function (DUF5110) 690 757 IPR033403 -
Vvi2g1083 1057 ProSitePatterns Glycosyl hydrolases family 31 active site. 407 414 IPR030458 -
Vvi2g1083 1057 Pfam Galactose mutarotase-like 152 218 IPR025887 -
Vvi2g1083 1057 CDD GH31_N 144 256 - -
Vvi2g1083 1057 SUPERFAMILY (Trans)glycosidases 247 597 IPR017853 -
Vvi2g1083 1057 Pfam Glycosyl hydrolases family 31 243 672 IPR000322 GO:0004553|GO:0005975
Vvi2g1083 1057 SUPERFAMILY Galactose mutarotase-like 141 229 IPR011013 GO:0003824|GO:0005975|GO:0030246
Vvi2g1083 1057 Gene3D - 581 663 IPR013780 -
Vvi2g1083 1057 Gene3D glycosyl hydrolase (family 31) 110 240 - -
Vvi2g1083 1057 Gene3D - 669 802 IPR013780 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g1083 Vvi-Chr2 16907409 16934203 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g1083 19 1057 Glycoside Hydrolase AT3G23640 71.950 0.0 1587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g1083 - - vvi:100254505 2165.58