Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g1082 ATGATGATGAGTCGCAGCGCCATGAAGCTTTTGTCGACAGCCACCGTCCGTACCATCCATGGCGGCGGTGAGTTTAGGCGAGGCTTTTTTGCTTTGGGAGCGCGGAACTTGAGCAGCACGGTGTCGGCCGTAAGAGAGAAGCCGCAGACGGAGCCCGGCTCCCGCTCCGCCGCTGGCCACAGCAGCTTTGAGGGCGGTGACAAGTCGGTTGTGAGTTACTGGGGCGTGGCTCCTGTGAAGCTGACCAAAGAGGACGGTACGGAATGGAAATGGAGCTGTTTCAAACCATCGGAGGCCTACAAAGCAGATGTGTCGATTGATTTGGGGAAGCATCATGTCCCTAGGGTATGGACTGAGAAAGTAGCTTATTGGGGAGTGAAAATGCTCCGACTCCCCACTGATATCTTCTTCAAGAGAAGGTTTGAAATGCGAGCAATGATGCTAGAAACCGTAGCGGCAGTGCCTGGCATGGTGGGAGGGATGCTCCTGCACTGCAAGTCGCTGAGGCGGTTCGAGCACAGCGGCGGATGGATCAGAGTACTCCTAGAAGAAGCCGAGAACGAGCGGATGCACCTCATGACCTTCATGGAAGTAGCCAAGCCCCGGTGGTACGAGCGCGCCCTTGTTTTCGCAGTTCAAGGCATTTTCTGGAACTTTTACTTCGTTGCCTACGTGATCTCTCCCAAAGTCGCCCACCGCGCTGTCGGCTATCTGGAAGAGGAGGCCATACACTCCTACAATGAATTCATAAAAGAGCTCGACAGCGGTAACATCCCGAACGTGCCGGCTCCGGCCATCGCCATTGATTACTGGCGCTTGGCACCAGACTCAACTCTCCGGGATGTTGTCATGGTTGTGAGAGCGGACGAGGCACATCATCGCGATGTAAATCACTACGCATCTGACATACACTATCAAGGACTCCAATTGAAGGAATTTCCTGCTCCTCTTGGGTATCACTGA 963 0.5441 MMMSRSAMKLLSTATVRTIHGGGEFRRGFFALGARNLSSTVSAVREKPQTEPGSRSAAGHSSFEGGDKSVVSYWGVAPVKLTKEDGTEWKWSCFKPSEAYKADVSIDLGKHHVPRVWTEKVAYWGVKMLRLPTDIFFKRRFEMRAMMLETVAAVPGMVGGMLLHCKSLRRFEHSGGWIRVLLEEAENERMHLMTFMEVAKPRWYERALVFAVQGIFWNFYFVAYVISPKVAHRAVGYLEEEAIHSYNEFIKELDSGNIPNVPAPAIAIDYWRLAPDSTLRDVVMVVRADEAHHRDVNHYASDIHYQGLQLKEFPAPLGYH* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g1082 320 PANTHER ALTERNATIVE OXIDASE 41 320 IPR002680 GO:0009916
Vvi2g1082 320 MobiDBLite consensus disorder prediction 41 57 - -
Vvi2g1082 320 FunFam Ubiquinol oxidase 73 317 - -
Vvi2g1082 320 Gene3D Alternative oxidase 71 316 IPR038659 -
Vvi2g1082 320 Pfam Alternative oxidase 110 301 IPR002680 GO:0009916
Vvi2g1082 320 MobiDBLite consensus disorder prediction 41 63 - -
Vvi2g1082 320 CDD AOX 137 304 IPR002680 GO:0009916
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g1082 Vvi-Chr2 16903963 16905207 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g1082 31 320 Miscellaneous Gene Families AT3G22360 72.759 9.52e-159 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g1082 K17893 - vvi:100252878 659.448