Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g1080 ATGAATCATAGTGCTATGGCAAAAGTCTCCGGTCTGCTTCTTAGGAAGGTCAGCCCGCAGGCCTCGAGATTCTCGAGGCCAGCGTATATGGGGTGGATGACAGTCCACCCCATGCCGGCTCGGGAGCAGAGTACTCTAGCATCGGGGGATGCAAAAGAGGAGAAGCCGATTCAAGTGCCGAAGACGGGCTCGGAAAATGGGGAGCAAAAGGCAATTGTGAGCTACTGGGGCGTGCCTCCGGCTAATCTGACCAAAGAGGATGGTTCGCCCTGGAAGTGGCACTGCTTTAGGCCATGGGAGACCTACAAGGCAGACATCTCCATTGATGTGGAAAAGCATCACAAACCAGTGAAGTTCATGGACAAATTCGCCTATTGGACTGTCCAAGCTCTCAAGATCCCTACTCACATGTTCTTTCAGAGAAAGCACATGTGCCATGCCATGCTGCTGGAGACGGTGGCAGCGGTGCCAGGCATGGTCGGGGGAATGCTGTTGCACTGCCAGTCCCCGAGGCGGTTCGAGCAGAGCGGAGGTTGGATCAAAGCCCTACTGGAAGAAGCCGAGAACGAGCGAATGCACCTCATGACCTTCATCGAGCTGGCCAAGCCCCAGTGGTACGAGCGCGCCATCGTCTTCGCCGTCCAGGGTGTATTCTTCAACGCATACTTCCTAACATACTTGGCCTCCCCCAAGGTCGCCCACCGCATCACCGGCTACCTGGAGGAGGAGGCCGTCCGCTCCTACACCGAATTCCTCAAGGACTTGGACAATGGCAGCTTTGAGAACGTGCCGGCCCCGGCCATTGCCATTGACTACTGGCGTCTGCCGGCGGAATCAACTCTCCGGGACGTTGTGGAGGTGATCAGGGCTGATGAGGCGCATCACCGGGACGTTAACCACTATGCATCGGATATACAATGTCAAGGGCACCAGTTCAAGGATGTTCCCGCACCTCTTGGATATCATTAG 969 0.5604 MNHSAMAKVSGLLLRKVSPQASRFSRPAYMGWMTVHPMPAREQSTLASGDAKEEKPIQVPKTGSENGEQKAIVSYWGVPPANLTKEDGSPWKWHCFRPWETYKADISIDVEKHHKPVKFMDKFAYWTVQALKIPTHMFFQRKHMCHAMLLETVAAVPGMVGGMLLHCQSPRRFEQSGGWIKALLEEAENERMHLMTFIELAKPQWYERAIVFAVQGVFFNAYFLTYLASPKVAHRITGYLEEEAVRSYTEFLKDLDNGSFENVPAPAIAIDYWRLPAESTLRDVVEVIRADEAHHRDVNHYASDIQCQGHQFKDVPAPLGYH* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g1080 322 Pfam Alternative oxidase 112 303 IPR002680 GO:0009916
Vvi2g1080 322 Gene3D Alternative oxidase 75 319 IPR038659 -
Vvi2g1080 322 MobiDBLite consensus disorder prediction 43 66 - -
Vvi2g1080 322 FunFam Ubiquinol oxidase 75 319 - -
Vvi2g1080 322 CDD AOX 139 305 IPR002680 GO:0009916
Vvi2g1080 322 PANTHER ALTERNATIVE OXIDASE 26 322 IPR002680 GO:0009916
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g1080 Vvi-Chr2 16900193 16901444 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g1080 23 322 Miscellaneous Gene Families AT3G22370 67.667 5.87e-155 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g1080 K17893 - vvi:100247765 674.47