Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g1078 ATGGCTTCTTGTCCACCGTTTGAATTCTCCAGCAAGTATTATCAAGTATCAGATGGAGGAGGGTGTGTGAGGCAGAGCAGCTTCTTCCAAGGAAAAGCAGTGCTCAACCAAGGTGTTGGCTACTCTGTTATTCTTGGTTTTGGTGCCTTCTTTGCTGTCTTTACCTCTTTTCTGGTATGGCTGGAGAAGCGATACGTTGGTTCCCGACATACATCAGAATGGTTTAACACTGCAGGCAGAAATGTAAAAACCGGACTAATCGCCAGTGTGATCGTATCCCAGTGGACTTGGGCTGCCACAATCTTGCAAAGCTCCAATGTAGCATGGCAGTATGGAGTTAGCGGCCCTTTCTGGTATGCCAGTGGAGCTACCATCCAGGTACTCTTGTTTGGCATCATGGCTATAGAGATCAAAAGAAAGGCTCCTCATGCTCATACTGTTTGTGAAATAGTTAAAGCTCGGTGGGGCACCGCTGCTCATATCGTCTTCCTCACTTTCTGCTTTATGACAAACATTATTGTTACTGCTATGCTTCTTCTTGGGGGCTCGGCAGTGGTGAATGCACTCACTGGAGTAAACATCTATGCTGCAAGCTTTCTGATACCGCTCGGGGTTATCGTTTATACAATAGCTGGAGGACTAAAGGCCACCTTCTTGGCGAGCTATATTCATTCTGTGATAGTTTACACGGCCAGCAACGAGCTTGGGAGCCCCAATGTTGTATACAAACGGTTGATGGAGGTTGCAGGCAAGTCGAGGATGTGCCAAGAGCCATCTTCCCATGATGGGCAAGCTTGTGGCCCTGTAAATGGGAACTACAAGGGGTCTTATCTAACGATGTTGAGCTCTGGGGGGCTTGTGTTTGGGATCATCAACATTGTTGGCAACTTTGGTACTGTTTTTGTTGACAATGGATACTGGGTGAGCGCCATAGCAGCAAGGCCTTCATCTACACATAAGGGTTACCTGTTGGGTGGGCTGGTGTGGTTCGCTGTGCCGTTCTCTTTGGCAACATCACTAGGCCTAGGAGCACTGGCGCTTGATCTACCAATAACTGAAAGTGAGGCAAGTCATGGACTTGTTCCCCCTGCTACAGCCATAGCTTTGATGGGAAAAGCCGGATCAATTCTGCTTCTCACGATGCTTTTCATGGCTGTAACTTCTGCTGGTTCCTCTGAGCTAATAGCAGTCTCCTCACTATGCACCTATGACATCTATCGTACTTACATAAACCCGAATGCAAGTGGGAAGAAAATCCTCCAAGTTTCAAGGATGGTTGTCCTGGGATTCGGGTGTTTCATGGGGCTTCTGGCAGTGATCCTGAACAAGGCAGGAGTTTCCCTAGGATGGATGTATCTGGCCATGGGAGTACTAATTGGATCAGCTGTTCTACCCATAGCTTTCATGCTTCTCTGGAGGAAAGCAAATGCATTTGGCGCTATTCTTGGCACAGTTACAGGGTGTATTCTAGGAGTGATCACTTGGTTATCGGTTACAAGCATCGAGTATGGGCAGGTGAACCTTGACACAACTGGGAGGAATGCACCTATGCTTGCTGGAAACCTTGTTTCCATTCTAACTGGAGGAGCTGTTCATGCTGTGTGTAGCCTTTTGTGGCCTCAGAACTATGACTGGGACACAACTAGGCAGATAACTACGGTGGAAAAGGAGAAGAGTGAACTGCCAGCAGAAGAGTTCAGAGAGGAGAAGCTGATCAGAGCAAAGGCATGGATCGTGAAATGGGGTGTTGGCTTTACTATCGTCATTGTTATACTCTGGCCTCTGCTCTCCCTTCCAATAGGGAAATTCAGTAAGGGGTATTTCACATTCTGGGCAATCATAGCTGTAGCATGGGGTACAATAGGATCAGCTGTCATCATCGCTCTACCTCTAGTAGAAAGCTGGGAAACGATCCAAAATGTGTTTCTTGGGATGTTTACAAATGACAGGCTGATGGAGAAGATTGAGGAGATGAATATCAAGTTGCAGTCCATAATACTGTCTATTCCTGAAGCAGAACGAACATACTTAATGGAGAAAGAGAAACTGAAGAAGAAAGAAGCATCAGAGTACCTAGCTCATTCTACTCCAAATTTATGA 2100 0.4662 MASCPPFEFSSKYYQVSDGGGCVRQSSFFQGKAVLNQGVGYSVILGFGAFFAVFTSFLVWLEKRYVGSRHTSEWFNTAGRNVKTGLIASVIVSQWTWAATILQSSNVAWQYGVSGPFWYASGATIQVLLFGIMAIEIKRKAPHAHTVCEIVKARWGTAAHIVFLTFCFMTNIIVTAMLLLGGSAVVNALTGVNIYAASFLIPLGVIVYTIAGGLKATFLASYIHSVIVYTASNELGSPNVVYKRLMEVAGKSRMCQEPSSHDGQACGPVNGNYKGSYLTMLSSGGLVFGIINIVGNFGTVFVDNGYWVSAIAARPSSTHKGYLLGGLVWFAVPFSLATSLGLGALALDLPITESEASHGLVPPATAIALMGKAGSILLLTMLFMAVTSAGSSELIAVSSLCTYDIYRTYINPNASGKKILQVSRMVVLGFGCFMGLLAVILNKAGVSLGWMYLAMGVLIGSAVLPIAFMLLWRKANAFGAILGTVTGCILGVITWLSVTSIEYGQVNLDTTGRNAPMLAGNLVSILTGGAVHAVCSLLWPQNYDWDTTRQITTVEKEKSELPAEEFREEKLIRAKAWIVKWGVGFTIVIVILWPLLSLPIGKFSKGYFTFWAIIAVAWGTIGSAVIIALPLVESWETIQNVFLGMFTNDRLMEKIEEMNIKLQSIILSIPEAERTYLMEKEKLKKKEASEYLAHSTPNL* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g1078 699 ProSiteProfiles Sodium:solute symporter family profile. 40 501 IPR001734 GO:0016020|GO:0022857|GO:0055085
Vvi2g1078 699 CDD SLC5sbd_DUR3 41 539 - -
Vvi2g1078 699 FunFam Urea active transporter 63 562 - -
Vvi2g1078 699 Gene3D Sodium/glucose cotransporter 63 591 IPR038377 -
Vvi2g1078 699 PANTHER - 12 682 IPR031155 GO:0015204|GO:0016020|GO:0071918
Vvi2g1078 699 Pfam Sodium:solute symporter family 76 487 IPR001734 GO:0016020|GO:0022857|GO:0055085
Vvi2g1078 699 NCBIfam sodium/solute symporter 75 487 IPR001734 GO:0016020|GO:0022857|GO:0055085
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g1078 1 687 Organic Solute Cotransporters AT5G45380 77.983 0.0 1113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g1078 K20989 - vvi:100242634 1362.44