Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g1075 ATGGAGGAGAAGGTGGAAGAAGAAGCAAGGGCATCAGAGTTAGAATCATCAGTGGGTCTACACCCCCATGGGAAGCTGCTCTCCTCCTACCTCGGCCTCAGCTTCTCCCTCTTCTTGGCCCTCCTCCCATCCTCCTCCTCAATCTCCCAGCTCTCGACCCTCCATCTCAAGCTGCTCCAAGCTGAACAAGAGCTCTGCCGCCTCAAGTCCCGCCGGAAGGAGGACTCCAAAGCCAACGCCAGAGTTGTTGAAATCTTCGCCGGCCACCGCGAAGGCTGGCGCAGGGAGGAGAAGCGTATGGTGGACCAGATCCACGCCGCCGCAGAAGAGATCGCCTGCCTGAGGGCCAGGGTGGCGGAGCTGGAGCGGTCCGAGGCCGAGCTGAAGGCCAGGGTGGAGGAACTCACCAGGGAAGTGGGGGAGAGGGAGGAGATGCTCGGGTTTGTGGCGAGGGAGAGGGAGGAGATGCTCGGGTTTGTGGCGAGGGAGAGCCAATACGCGTGTTTGGATGACGGGAAAGTTAGGCTTCCGGCGGCGGAAGCAGCGGAGGAGGAGGAGGAGGTGGGGACGGTGTACGGTCAGCCGGAGTTTGTGGCTTCGGCTTCCAAGTTGTGGTCGGCCGGAGATGGTCTGTGGCAGGATGTACAGTATGAACCCGTCGAACCATTATATCATATGAAGCATTTTGTAGCAAGAAGGGAGTCACCTTGGAAGGTACACGGAGAATCAACAGGAGTGTCCTCTAAACTTAAATTACTAGAGCAGGAACTGCTGAATTTGGAAAGAGTTGGGAAGAGTGATCTATCAAAGGTGCCATCCTTGATGAGGAAACAGGCAAAGAGATACCAAGCTCTTTCCGGGAAGATTGATGATCTATGCCAAAGAATGCAAGCAAGCGATCCATGCGAGCCCACCCTGAGCTCAGAGTTCCGAACTCAAAGACAAACAGAGTTTCTGCTGGAGGCATTTCGACTCCAGCAGCGGGCATCAGAAACCGGTCAAAAGTTCATGGCATTACAAACAGAGACGGGGAAGAGTCGCATGGGAGGAGGAGGAGGAGAGGAGCTGGGCCTGAGCACAAAGCGGTCACTGGACTCCATCAGAAACAACCTGAAAGAAATCCAGAGAAACTTGGAGATATGGTTGGCGAGAATCATCGGAGATCTGGAAGGCATTCTGGCCAGAGATGGCGCCTCACGTGTAAGGGAATACTACATCTCTAGATACCCTTTTGTTCAATAG 1242 0.5483 MEEKVEEEARASELESSVGLHPHGKLLSSYLGLSFSLFLALLPSSSSISQLSTLHLKLLQAEQELCRLKSRRKEDSKANARVVEIFAGHREGWRREEKRMVDQIHAAAEEIACLRARVAELERSEAELKARVEELTREVGEREEMLGFVAREREEMLGFVARESQYACLDDGKVRLPAAEAAEEEEEVGTVYGQPEFVASASKLWSAGDGLWQDVQYEPVEPLYHMKHFVARRESPWKVHGESTGVSSKLKLLEQELLNLERVGKSDLSKVPSLMRKQAKRYQALSGKIDDLCQRMQASDPCEPTLSSEFRTQRQTEFLLEAFRLQQRASETGQKFMALQTETGKSRMGGGGGEELGLSTKRSLDSIRNNLKEIQRNLEIWLARIIGDLEGILARDGASRVREYYISRYPFVQ* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g1075 413 PANTHER RIBONUCLEASE P PROTEIN SUBUNIT P38-LIKE PROTEIN 235 413 - -
Vvi2g1075 413 Coils Coil 364 384 - -
Vvi2g1075 413 Coils Coil 104 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g1075 Vvi-Chr2 16795357 16798403 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g1075 - - vvi:100261374 718.768