Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g1074 ATGGGCTTGAAGGAAGAGTTTGAGGAGTATGCTGAGAAAGCTAAGACCCTCCCTGAGAATACAACAAACGAAAACAAACTCATTCTCTATGGGCTCTACAAACAAGCCACTGTTGGGAACGTGAACACCAGCCGTCCGGGGATATTCAACCTGAGGGAGCGAGCAAAGTGGGATGCCTGGAAGGCTGTTGAAGGAAAATCCACAGAGGAAGCCATGAACGACTACATCACCAAGGTAAAACAGTTGCTGGAGGAAGCTGCTGCTGCTGCTGCTTGA 276 0.4928 MGLKEEFEEYAEKAKTLPENTTNENKLILYGLYKQATVGNVNTSRPGIFNLRERAKWDAWKAVEGKSTEEAMNDYITKVKQLLEEAAAAAA* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g1074 91 PRINTS Acyl-coA-binding protein signature 65 82 IPR000582 GO:0000062
Vvi2g1074 91 PRINTS Acyl-coA-binding protein signature 21 39 IPR000582 GO:0000062
Vvi2g1074 91 PRINTS Acyl-coA-binding protein signature 44 59 IPR000582 GO:0000062
Vvi2g1074 91 PRINTS Acyl-coA-binding protein signature 4 19 IPR000582 GO:0000062
Vvi2g1074 91 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 3 88 IPR000582 GO:0000062
Vvi2g1074 91 Gene3D - 1 91 IPR014352 -
Vvi2g1074 91 SUPERFAMILY Acyl-CoA binding protein 3 85 IPR035984 GO:0000062
Vvi2g1074 91 ProSitePatterns Acyl-CoA-binding (ACB) domain signature. 21 39 IPR022408 -
Vvi2g1074 91 PANTHER ACYL-COA-BINDING PROTEIN, ACBP 5 84 - -
Vvi2g1074 91 Pfam Acyl CoA binding protein 5 79 IPR000582 GO:0000062
Vvi2g1074 91 FunFam Acyl-CoA-binding domain-containing protein 5 2 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g1074 Vvi-Chr2 16785919 16789225 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g1074 1 91 Acyl Lipid Metabolism Gene Families AT1G31812 75.824 1.04e-46 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g1074 K08762 - sind:105159708 155.992