Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g1073 ATGCAGAGTCCACCGCGCGCTACTCAAAACGACGCTGCCGGAGTCCCGACTCCAACTGATAAGACGTCAAGGGAAGAGGCTCCTGCAATGGGGGAATGCAAAGGTGTGGAATCTGTGGGTGTGGATGTTGATGAAGTAGCTCCTCTTGGAGTAGATAACTTCAAGAAAGTTTCAGTCTTACCACTTGTTTTCCTCATCTTCTATGAGGTTTCAGGGGGGCCATTTGGCACTGAGGACGTTGTGAAAGCTGCTGGCCCTCTTCTAGCCCTACTCGGGTTTTTGATCTTTCCCTTCATATGGAGCATTCCTGAAGCGTTAATCACAGCTGAAATGGGCACCATGTTCCCTGAAAATGGTGGGTATGTGGTTTGGGTGTCGTCTGCTTTGGGGCCTTATTGGGGGTTTCAGCTAGGCTGGATGAAATGGTTTAGTGGTGTTATTGACAATGCTCTATACCCAGTTCTGTTTCTGGACTATTTGTGTTCCACTGTCCCTGCTTTAAGTAGTGGCTTACCAAAAATTGCAGTGGTTTTAGCTTTGATTGTAGTTCTCACTTACATGAACTACAGGGGTTTAACCATTGTGGGTAGGGCTGCTATTGTGCTGGGTTTGTTTTCAATCCTTCCATTTGTAATTATGGGACTTCTTTCGATTCCAAAGTTGAAGCCCTCCAGATGGTTGGTGGTAGAAAAGGATGTGGATTGGAGACTGTATTTGACCAAACTCTTTTGGAACCTGAACTACTGGGATTCAATCAGTACTATTGCAGGGGAGGTGGACAACCCAAAAAAGACTCTTCCAATAGCACTGTTTTGTGCCCTGATCTTGGTCGTCCGCAGCTATTTCTTCCCTCTATTAATTGGCACTGGTGCTCTTTCTCTTAATCGTGAGGCTTGGACTGATGGGCATTTCTCAAATGTTGCCAAAATGATAGGGGGGGTCTGGTTGAGTTGGTGGATTACAGGGGCTGCTGCAGCGTCGAATCTGGGGATGTTTATAGCTGAAATGAGCAGTGATTCCTTCCAACTTTTGGGGATGGCAGAGCGGGGAATGCTTCCCAGTGTCTTTGCCAAAAGGTCGCGCTATGGCACCCCACTCGTTGGAATTCTATTGTCAGCCTCTGGAGCGCTTTTGCTTTCATGGATGAGCTTTCAAGAGACGATAGCTGCAGAAAACTTCTTGTATTGTTTTGGAATGATTTTGGAGTTCATAGCATTTGTTCGATTGAGGATTAAATACCCAGTTGCTTCTCGCCCATACAAGATACCTCTTGGGACAATTGGATCTATTCTTATGTGTATTCCTCCAACCATATTGATCTGTATCACGGTGGCTCTTTCTTCACTCAAAGTTGTGGTAGTGAGTCTTACTGTTGTGATCATTGGACTTCTGGTGCAGCCTTGTCTGAAATGTGCTGAGAGAAAGAAATGGCTTAAATTCTCAGTGAGTTCCAATCTCCCTGACCTTAATGGTGAAAATAATGAGAACGTCGTACCTCTAGTGGATTAA 1509 0.4546 MQSPPRATQNDAAGVPTPTDKTSREEAPAMGECKGVESVGVDVDEVAPLGVDNFKKVSVLPLVFLIFYEVSGGPFGTEDVVKAAGPLLALLGFLIFPFIWSIPEALITAEMGTMFPENGGYVVWVSSALGPYWGFQLGWMKWFSGVIDNALYPVLFLDYLCSTVPALSSGLPKIAVVLALIVVLTYMNYRGLTIVGRAAIVLGLFSILPFVIMGLLSIPKLKPSRWLVVEKDVDWRLYLTKLFWNLNYWDSISTIAGEVDNPKKTLPIALFCALILVVRSYFFPLLIGTGALSLNREAWTDGHFSNVAKMIGGVWLSWWITGAAAASNLGMFIAEMSSDSFQLLGMAERGMLPSVFAKRSRYGTPLVGILLSASGALLLSWMSFQETIAAENFLYCFGMILEFIAFVRLRIKYPVASRPYKIPLGTIGSILMCIPPTILICITVALSSLKVVVVSLTVVIIGLLVQPCLKCAERKKWLKFSVSSNLPDLNGENNENVVPLVD* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g1073 502 PIRSF AA_transporter 53 501 - -
Vvi2g1073 502 Pfam Amino acid permease 71 452 IPR002293 GO:0016020|GO:0022857|GO:0055085
Vvi2g1073 502 MobiDBLite consensus disorder prediction 1 31 - -
Vvi2g1073 502 MobiDBLite consensus disorder prediction 1 17 - -
Vvi2g1073 502 FunFam Amino acid permease, putative 53 481 - -
Vvi2g1073 502 PANTHER POLYAMINE TRANSPORTER PUT1 53 492 IPR044566 GO:0022857
Vvi2g1073 502 Gene3D Amino acid/polyamine transporter I 55 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g1073 Vvi-Chr2 16751116 16757884 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g1073 37 495 Organic Solute Cotransporters AT1G31830 73.102 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g1073 - - vvi:100258009 957.207