Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g1072 ATGGAGAGTCCACCGAGCGCTCCTCAAAACGATGTCGTCGGAGTCCCGACTCCAACCGTTGAGACGTCAAAGGAAGAGGCTCCTGCAATGGGGGAATGCAAAGGTGCGGAATATGTGGGTGTGGATGTTGATGAAGTAGCTCCTCTTGGAGTAGATAACTTCAAGAAAGTTTCAGTCTTACCACTTGTTTTCCTCATCTTCTATGAGGTTTCAGGGGGTGCATTTGGCATTGAGGACGCTGTGAGAGCTGCAGGCCCTCTTCTGGCCTTGCTCGGGTTTTTGATCTTCCCCTTCATATGGAGCATTCCTGAGGCGTTAATCACAGCTGAAATGGGCACCATGTTCCCTGAAAATGGTGGGTATGTGGTTTGGGTGTCGTCTGCTTTGGGGCCTTATTGGGGGTTTCAGCTAGGCTGGATGAAATGGTTTAGTGGAGTTATTGACAATGCTCTATACCCACTTCTGTTTCTGGACTATTTGAGTCCCACTGTCCCTGCTTTAAGTGGTGGCTTACCAAGAATTGCAGCGGTATTGGCTTTGATTGTAGTTCTCACTTACATGAACTACAGGGGTTTAACCATTGTGGGATGGGCTTCCGTTCTGCTGGGTTTGTTTTCAATCCTTCCATTTGTAATTATGGGACTCGTTTCGATTCCAAAGTTGAAGCCCTCCAGATGGTTGGTGATAGAAAAGGATGTGAATTGGAGTTTGTATTTGAGCACTCTCTTTTGGAACCTGAACTACTGGGACTCAATCAGTACTATTGCAGGGGAGGTGGAAAACCCAAAAAAGACTCTTCCAATGGCACTGTTTTGTGCCCTGATCTTGGTCGTCCGCAGCTATTTCTTCCCTCTTTTAATTGGCACTGGCGCCCTTTCTCTTGATCGTGAGGCTTGGACTGATGGGTATTTCTCATATGTTGCCAAAATGATAGGGGGAGTCTGGTTGAGCTGGTGGATTGCAGGAGCTGCTGCAGCGTCCAATCTGGGGATGTTTGTAGCTGAAATGAGCAGTGATTCCTTCCAACTTTTAGGGATGGCGGAGCGTGGAATGCTTCCCAGTGTCTTTGCCAAAAGGTCGCGCTATGGCACCCCGCTCATTGGAATTCTATTATCAGCTTCTGGAGTGCTTTTGCTTTCATGGATGAGCTTTCAAGAGACAATAGCTGCAGAAAACTTCTTGTATTGTTTTGGAATGATTTTGGAGTTCATAGCATTTGTTCGATTGAGGATTAAATACCCGGCTGCTCCTCGCCCATACAAGATACCTCTTGGGACAATTGGATCTATTCTTATGTGTATTCCTCCAACCATATTGATCTGTATCATGGTGGCTCTTTCTTCACTCAAAGTTGCGGTAGCGAGTCTTATTGTTGTGATCATTGGACTTCTGATGCAGCCTTGTCTCAAATGTGCTGAGAGAAAGAAATGGTTTAAATTCTCAGTGAGTTCCGATCTCCCTGACCTTAATGGTGAAAATGATGAGAATGTCGTACCTCTAGTGGATTAA 1509 0.4599 MESPPSAPQNDVVGVPTPTVETSKEEAPAMGECKGAEYVGVDVDEVAPLGVDNFKKVSVLPLVFLIFYEVSGGAFGIEDAVRAAGPLLALLGFLIFPFIWSIPEALITAEMGTMFPENGGYVVWVSSALGPYWGFQLGWMKWFSGVIDNALYPLLFLDYLSPTVPALSGGLPRIAAVLALIVVLTYMNYRGLTIVGWASVLLGLFSILPFVIMGLVSIPKLKPSRWLVIEKDVNWSLYLSTLFWNLNYWDSISTIAGEVENPKKTLPMALFCALILVVRSYFFPLLIGTGALSLDREAWTDGYFSYVAKMIGGVWLSWWIAGAAAASNLGMFVAEMSSDSFQLLGMAERGMLPSVFAKRSRYGTPLIGILLSASGVLLLSWMSFQETIAAENFLYCFGMILEFIAFVRLRIKYPAAPRPYKIPLGTIGSILMCIPPTILICIMVALSSLKVAVASLIVVIIGLLMQPCLKCAERKKWFKFSVSSDLPDLNGENDENVVPLVD* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g1072 502 PIRSF AA_transporter 53 501 - -
Vvi2g1072 502 PANTHER POLYAMINE TRANSPORTER PUT1 53 491 IPR044566 GO:0022857
Vvi2g1072 502 FunFam Amino acid permease, putative 53 481 - -
Vvi2g1072 502 MobiDBLite consensus disorder prediction 1 27 - -
Vvi2g1072 502 Pfam Amino acid permease 63 462 IPR002293 GO:0016020|GO:0022857|GO:0055085
Vvi2g1072 502 Gene3D Amino acid/polyamine transporter I 54 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g1072 Vvi-Chr2 16738095 16740568 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g1072 32 495 Organic Solute Cotransporters AT1G31830 73.077 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g1072 - - vvi:100247760 998.038