Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g1071 ATGGGGGAATGCAATGGTGTGGAATATGTGGGGGTGGGTGTGGGTGTTGATGAATTAGCTCCTCTCAGGGTGGATAACTTCAAGAAAGTTTCAGTTCTACCACTTGTTTTCCTTATCTTCTATGAGGTGTCTGGGGGCCCATTTGGCATTGAGGACAGTGTGGGGGCTGCTGGCCCTCTTCTAGCTCTGCTCGGATTTTTGATCTTTCCCTTTATATGGAGCATTCCTGAAGCGCTAATCACAGCTGAGATGGGGACCATGTTCCCTGAAAATGGTGGTTATGTGGTTTGGGTGTCATCGGCTTTGGGGCCTTATTGGGGGTTTCAGCAAGGGTGGATGAAATGGTTGAGTGGAGTTATTGACAATGCTTTATACCCAGTTCTGTTTCTGGACTATTTGGATTCCTCTGTCCCTGCTTTAAGTGGTGGTTTACCGAGAATTGCAGCGGTTTTGGCTTTGACTGTAGTTCTTACTTACATGAACTACAGGGGCTTAACCATTGTGGGATGGGCTGCTATTTTGCTGGGTGTATTTTCAATCCTTCCTTTTGTGATCATGGGACTTGTGGCAATTCCAAAGTTGAAGCCCTCACGATGGTTGGTAGTGGAAAAGGATGTGGATTGGAATTTGTATTTGAACACACTCTTTTGGAATCTGAACTACTGGGATTCAATCAGTACTCTTGCAGGAGAGGTGGAAAACCCAAAAAGGACTCTTCCAAAGGCACTCTTTTATGCCCTGATCTTGGTCGTGCTCGGGTATTTCTTCCCTCTTTTAATTGGTACTGGTGCTATTCCTCTTGATCGTGAGGCTTGGACTGATGGGTATTTCTCAGATGTTGCTAAAATGATAGGGGGAGTCTGGTTGGGTTGGTGGATTACAGGGGCTGCTGCAGCGTCGAATCTGGGGATGTTTGTAGCTGAAATGAGCAGTGATTCCTTCCAACTTTTGGGGATGGCAGAGCGGGGAATGCTTCCCAGCATCTTTGCCAAAAGGTCGCACTATGGCACCCCACTCATTGGAATTCTATTCTCAGCTTCTGGTGTGCTTTTGCTTTCATGGATGAGCTTTCAAGAAATCATAGCTGCAGAAAACTTCTTATATTGTTTTGGAATGATTTTGGAGTTCATTGCATTTGTTCGATTGAGGATTAAATACCCGGCTGCATCTCGCCCATACAAGATACCTCTTGGGACAGTTGGGTCTATTCTAATGTGTGTTCCTCCAACCATATTGATCTGCATTGTTCTGGCTCTTTCTTCACTCAAAGTCGCGGTTGTAAGTCTTATTGCTGTGATAATCGGCCTTGTGCTGCAGCCTTGCCTCAAATGCATAGAGAGAAAGAGATGGCTTAAATTCTCAGTGAGTTCTGATCTCCCTGATCTTCACTGTGAAAATCATGAGAATGTTGAACCGCTGCTAAAGAAACCGAAAACTACTAGATAG 1446 0.4516 MGECNGVEYVGVGVGVDELAPLRVDNFKKVSVLPLVFLIFYEVSGGPFGIEDSVGAAGPLLALLGFLIFPFIWSIPEALITAEMGTMFPENGGYVVWVSSALGPYWGFQQGWMKWLSGVIDNALYPVLFLDYLDSSVPALSGGLPRIAAVLALTVVLTYMNYRGLTIVGWAAILLGVFSILPFVIMGLVAIPKLKPSRWLVVEKDVDWNLYLNTLFWNLNYWDSISTLAGEVENPKRTLPKALFYALILVVLGYFFPLLIGTGAIPLDREAWTDGYFSDVAKMIGGVWLGWWITGAAAASNLGMFVAEMSSDSFQLLGMAERGMLPSIFAKRSHYGTPLIGILFSASGVLLLSWMSFQEIIAAENFLYCFGMILEFIAFVRLRIKYPAASRPYKIPLGTVGSILMCVPPTILICIVLALSSLKVAVVSLIAVIIGLVLQPCLKCIERKRWLKFSVSSDLPDLHCENHENVEPLLKKPKTTR* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g1071 481 PANTHER POLYAMINE TRANSPORTER PUT1 26 466 IPR044566 GO:0022857
Vvi2g1071 481 PIRSF AA_transporter 26 477 - -
Vvi2g1071 481 FunFam Amino acid permease, putative 26 454 - -
Vvi2g1071 481 Gene3D Amino acid/polyamine transporter I 28 452 - -
Vvi2g1071 481 Pfam Amino acid permease 35 435 IPR002293 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g1071 Vvi-Chr2 16704244 16706112 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g1071 3 475 Organic Solute Cotransporters AT1G31830 75.789 0.0 743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g1071 - - vvi:100249510 907.131