Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g1057 ATGGCTGAAGAAGCTGATAAAGACCAGGGAAATGGGCAGAGTTCATCGGCTGCCGAGAAGGACACAGGAGTCCAAAAGAAGAAGCGGAGAGGAATCATATCTCGCATTTGGAATGGCCTATTTAGAAGACATGGTGATGATTTTGAGAAAAGGCTGCAACACATTTCCAAGGAAGAAGCTTCTGTTCTAGCTAGGATGAAGAGGAGATCTCAAAGTTCGAGGACAATGACAAGGAATCTCATAGTACTGTCAGTGATTTTGGAGGTTATTGCAGTGGGTTATGCTATCATGACAACAAGATCCGTAGATCTGAACTGGAAGATGAGGGCTTTTCGTGTTCTGCCAATGTTTCTGTTGCCTGGTTTGTCTTCTGCTGCTTATTCAGTGATTGTAAGCCTCACAAGAATGTGTGACCGCAGGGATCAGAAAACTCTAGAGCGCCTTCGAGCCGAAAGACGAGCAAAAATTGATGAACTCAAAGAGAGGACAAATTATTATACCACACAACAGCTCATTCAGAGATATGACACTGATCCAGCAGCAAAGGCTGCTGCTGCAACTGTCCTGGCATCAAAGTTGGGTGCAGAGTCAGGCTTAAAAGTGTTTGTCGGTGATGAATCTCAGCTTGATGTTGCAACAGCGAAGAGCAATGATGTAGAATTAACACAATCTAGTGGGCTGCGAAATAGAAAACAGTTGCAAACCAGATCCGGTAATCCAGCTAATCCCACAATGCATCCCTCTGAGGGGGAAATGCCCCATCAAGCAGGGGTCGAGGGTACTGGAACTTCTGGGCATGATCAGTTGGTTGTGGAGCATTACCCTCATCAAGGGGTGGCCCGATATGATGGGGGATGGATTGCTCGAATTGCAGCATTGCTTGTGGGTGAGGATCCAACACAGTCATATGCGCTCATATGCGGGAACTGCCATATGCACAATGGCCTTGCCCGGAAGGAGGATTTCGCCTACATAACCTACTATTGTCCACACTGCAATGCCCTGAATCGGTCACTGCAACAGGAAGAGCATGCGTCTGGCTCCAAGTCCCCAGGGGCGGTGAATCTGTCACAGCAACTGGAAGAGCATGCTTCTGCCTCCAAGTCCCCAGGGGCAGTGAATCGGTCACAGCAACTGGAAGAGCATGCTACTGGCTCCAAGTCCCCAGGGGCGGGCAGTGCTGATGCAGTCAACAATGCTGCCGGTCCTGTGACTGATAGCGGGAGGACAAGCAGCAGCCCAGTAAGAGCTGCATCAGAGATTGAGCAAGTAACTGAGAAGGCAGATTAG 1290 0.4891 MAEEADKDQGNGQSSSAAEKDTGVQKKKRRGIISRIWNGLFRRHGDDFEKRLQHISKEEASVLARMKRRSQSSRTMTRNLIVLSVILEVIAVGYAIMTTRSVDLNWKMRAFRVLPMFLLPGLSSAAYSVIVSLTRMCDRRDQKTLERLRAERRAKIDELKERTNYYTTQQLIQRYDTDPAAKAAAATVLASKLGAESGLKVFVGDESQLDVATAKSNDVELTQSSGLRNRKQLQTRSGNPANPTMHPSEGEMPHQAGVEGTGTSGHDQLVVEHYPHQGVARYDGGWIARIAALLVGEDPTQSYALICGNCHMHNGLARKEDFAYITYYCPHCNALNRSLQQEEHASGSKSPGAVNLSQQLEEHASASKSPGAVNRSQQLEEHATGSKSPGAGSADAVNNAAGPVTDSGRTSSSPVRAASEIEQVTEKAD* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g1057 429 MobiDBLite consensus disorder prediction 359 384 - -
Vvi2g1057 429 MobiDBLite consensus disorder prediction 1 26 - -
Vvi2g1057 429 MobiDBLite consensus disorder prediction 403 419 - -
Vvi2g1057 429 PANTHER ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK 26 423 IPR040115 GO:0071786
Vvi2g1057 429 Pfam Predicted integral membrane zinc-ribbon metal-binding protein 286 336 IPR019273 -
Vvi2g1057 429 MobiDBLite consensus disorder prediction 216 266 - -
Vvi2g1057 429 Coils Coil 142 162 - -
Vvi2g1057 429 MobiDBLite consensus disorder prediction 359 429 - -
Vvi2g1057 429 MobiDBLite consensus disorder prediction 216 244 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g1057 K23292 - vvi:100256174 838.18