Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g1056 ATGTTGCTTCACATGTTGAAGGATGAGAGATTGGTTCCGCATCAGTTGACTCAGTATTCGACGTTGGAAGAATTGAGTATTGGGAAAATCCAGTTTAAGGTCTTCGGTTTGGGGGGGCATCAGATTGCTCGCGGAGTCTGGAAGGTTTATTATGCCAAAGTGGATGTTGTCATGTACCTGGTGGATGCCTATAATAAGGAGAGGTTTGCAGAATCCAAGAAAGAATTGGATGCACTACTCTCTGATGAAGTCCTGGTCGATGTCCCATTCCTTATGTCTACGAGCTCAAGTCAGAATTCTCATTTAGTTTCAAAGGCTACTTGTTTGTGGGAGTCGTTGCTAGCTCGTAATAGTCAATATGAAGTTCTTACATCAAGCCCTATTGAGGACTTGATAGCTCACATGGAGCATAGGTATCGCATTTCTGGGTCATCTTTACTTGCAGCTATGGATCAAAGTTCTCAGATTCCTCATACGGATGTATTAACTGTCCAATCGAGTGATCTAGCTTCAAGCCATTTGGATGGCAGAGAATAG 537 0.4302 MLLHMLKDERLVPHQLTQYSTLEELSIGKIQFKVFGLGGHQIARGVWKVYYAKVDVVMYLVDAYNKERFAESKKELDALLSDEVLVDVPFLMSTSSSQNSHLVSKATCLWESLLARNSQYEVLTSSPIEDLIAHMEHRYRISGSSLLAAMDQSSQIPHTDVLTVQSSDLASSHLDGRE* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g1056 178 Pfam ADP-ribosylation factor family 2 94 IPR006689 GO:0003924|GO:0005525
Vvi2g1056 178 PANTHER RE74312P 2 110 IPR006687 GO:0005525|GO:0006886
Vvi2g1056 178 Gene3D - 1 135 IPR027417 -
Vvi2g1056 178 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 92 IPR027417 -
Vvi2g1056 178 ProSiteProfiles small GTPase SAR1 family profile. 1 156 - -
Vvi2g1056 178 SMART sar_sub_1 1 157 IPR006689 GO:0003924|GO:0005525
Vvi2g1056 178 PRINTS GTP-binding SAR1 protein signature 43 68 IPR006689 GO:0003924|GO:0005525
Vvi2g1056 178 PRINTS GTP-binding SAR1 protein signature 16 40 IPR006689 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g1056 Vvi-Chr2 16443473 16444009 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g1056 K07953 - vvi:100266574 349.747