Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g1039 ATGTCTGTAGTAACAGTAGCCGAATCAAAATCAAGAGGCGATATTCAGCACTCATCAACTCCGTTGTGCAGACCATGGGATCGAGGAGATCTAATGCAGAGGTTAGCTACATTCAAGTCAATGACATGGTTTGCCAAACCCGAGGTAGTAAGTGCTATAAATTGTGCAAGGAGAGGTTGGGTCAATGTAGATATGGACATCATAGCATGTGAAGCTTGTGGAGCACGTCTCCTTTTCTCTGCTCCATCATCTTGGACAAGGCAGCAAGTTGAGAAAGCTGCATTAGTTTTTAGCTTAAAGCTGGACAATGGACACAGACTACTTTGCCCCTGGATTAACAATGCCTGTGATGAGGAGCTAGCACAGTTCCCCCCTGCAACAGTTCAAGATTTAATGGATGGTTACAGAGAACGTGCTTCTGCACTTTTGAAACTTACAGCTCTTCCAAGTATCTCCTCTGCAGCCGTTGGTTACATGAGAAGCCCTCAGCTGGAACATTTTCTTGGACAGTCATCAATGTTAGAATGTGGCACCATATATTCTAATATGCCTCAAACAGAATACATTGGCAGTCAACCTGAAGCAATTTTCTATTTTCAGGCACAAAAGCTCATAAGTTTATGTGGTTGGGAACCTCGTTCACTGCCTTATGTGGTTGACTGCAAGGACCAATCGTATCAGCCTGCTAAAGATGCCAATCTTTTAAATTTATCTCATGTAGTTGCTAATGTGGAGAATCGTTCCATTAATATATGTTCTATGCCTGATGAAATTAATGAAGCAAATGAAGACCCCATGGCTTATGGTAAACTGCAATCTGATCCATGCTCTGTTGTTCTAGATTGCAGGCTTTGTGGAGCCAGTGTTGGATTATGGGCTTTCTCTACAGTTCCATGCCCTGTAGAGTTTTTTAGAGTAGTTGGATATTCAGAAGTCAATGGTGAAAACAGTTCCTCTCATTGTAAAGAAAACATCTTCTCTTCCACTCCTGGTGCTTCTAAAATCCAAGGATTTGGCACTGAAAATCATGTCAATTCTGGAGAGGGTACCATGAGCACTGCATCAAATAGCACTATATCATCAAGTGAAAGATTGTTAAGTCATTTGACAATTGCAGGGGGTCCTTCACCAACAAAACAGAACTTCAAAGCAACAATTTCTTTGCCTGTTATTGGTCGGAATTTAAGGGCGCGGTTTTCATATGATTCTGATTTTAGGGATCGTAAATATCCTAACCAAGACAAAATTCAATTTGATTCCCTTAAAAAGGATTTATTTAAGGAGGGAAATAACTACATAGAAAACAGTCCTACTGGACAGGTCGTCCATCCAGAACTCACTGGCCAGCTGAAAAACAAAAGAAATGATGGTGAGCCTTGTAATTCCACAAATGGTTATCAATCTCCCTCTTTGAAACAAAGCATTAATGAAGAAGTTGATGCAACTAGAAAAGAGAATAACACTGCCTTACCCTTGGAAGGACCAAGAGTTGTTGCACAGGGACTTAGTTTTCCTGAAACTGATATGCATGATCTCATTGAGAAAAGTGAAACAGAGAATGCAGAAAATGTAATACAGGGTTCTGTTCAAAATGACAAGTTGGCTGATAGCACAGGAAATGTTGAGACAGTCAACCCAGCAGTGGAGAAAACACAAGATGTGATACAAGGTTCTCAAGTTAGAGACTCTTGCATTTTATCCCCAGATGCTAATGTTACGACAAAAAGTGGAGATGATTGCAATCTGCAACCAATACCAGGTAGTACTGATATATTAGGTAAAAACATAATTTCAAGAGATGGCAATCAAGAGTCTTCGTGTGTTGGCTCTTGTATGGAGAGAAATATAGATGTTGATGTGGCCTCTGAAGGAGAGAAATGCTCTGATGCGCAAAACAATTTGGACATGCAATTAAATAGCCATGGTGGTAATGTAGACAAGGACAGAGGGCAGAAAGAAGGTTTTGCCTGTGGCATAGCAAAGGATCCAAAGCAACTACCACTAGACAAAGCCATGGAGTTTGATCCAATCAGGCAGCACAGACACTTTTGCCCCTGGATTGCTTCAGCAGGCAGTGCAGCACCTGGATGGAAACAAACACTATCTGCTTTACAACGCGGGAAGGAATTTTCTCCTTATTCACCTTCAAAGTTGCCATCTCTCTCCATGATTGAGGTGGATGATCCCATTGCTTCAATTAGAAAGCTTTTTGCATCCCCATCAGCAAAAAGAATGAAGCTCACTCATGGATCAAGCTAG 2259 0.4121 MSVVTVAESKSRGDIQHSSTPLCRPWDRGDLMQRLATFKSMTWFAKPEVVSAINCARRGWVNVDMDIIACEACGARLLFSAPSSWTRQQVEKAALVFSLKLDNGHRLLCPWINNACDEELAQFPPATVQDLMDGYRERASALLKLTALPSISSAAVGYMRSPQLEHFLGQSSMLECGTIYSNMPQTEYIGSQPEAIFYFQAQKLISLCGWEPRSLPYVVDCKDQSYQPAKDANLLNLSHVVANVENRSINICSMPDEINEANEDPMAYGKLQSDPCSVVLDCRLCGASVGLWAFSTVPCPVEFFRVVGYSEVNGENSSSHCKENIFSSTPGASKIQGFGTENHVNSGEGTMSTASNSTISSSERLLSHLTIAGGPSPTKQNFKATISLPVIGRNLRARFSYDSDFRDRKYPNQDKIQFDSLKKDLFKEGNNYIENSPTGQVVHPELTGQLKNKRNDGEPCNSTNGYQSPSLKQSINEEVDATRKENNTALPLEGPRVVAQGLSFPETDMHDLIEKSETENAENVIQGSVQNDKLADSTGNVETVNPAVEKTQDVIQGSQVRDSCILSPDANVTTKSGDDCNLQPIPGSTDILGKNIISRDGNQESSCVGSCMERNIDVDVASEGEKCSDAQNNLDMQLNSHGGNVDKDRGQKEGFACGIAKDPKQLPLDKAMEFDPIRQHRHFCPWIASAGSAAPGWKQTLSALQRGKEFSPYSPSKLPSLSMIEVDDPIASIRKLFASPSAKRMKLTHGSS* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g1039 752 MobiDBLite consensus disorder prediction 1 18 - -
Vvi2g1039 752 MobiDBLite consensus disorder prediction 454 472 - -
Vvi2g1039 752 MobiDBLite consensus disorder prediction 1 20 - -
Vvi2g1039 752 PANTHER NUCLEAR-INTERACTING PARTNER OF ALK 12 748 - -
Vvi2g1039 752 MobiDBLite consensus disorder prediction 450 472 - -
Vvi2g1039 752 Pfam C3HC zinc finger-like 25 150 IPR012935 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g1039 Vvi-Chr2 15843009 15864423 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g1039 - - vvi:100243076 1511.89