Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g1022 ATGCGTGGCCTTATGCATAAGTTAGGGGCTCGAAGACATAGTGGGGTAAATTCAGATGCTGGTGGTCACTCTGGCGATGCACCAGCCAACACTCCCACAGTCGATGACCATGCATTTCTTGGTGATGAGTACATGGCTTCACATGCTGCAGACCATGTGATAGACACACCAGATCGCGTTGTTGCCCCTGAGTTTGAGTTGCAGCCCAGTGTACCCATTAATGTAGTAAGCGGGAAGAGACTTGATGTCAGGAACTATTCTTCATGGCTGGGGCAAGCTAAGACACTAATGTTTGTTCACATTAGCCCTGAACTGGATGCGGATGGAGAAACAATTAGCACAGTTAAATTTGCAGAGCAATTTGCCACGGTAGAACTTAGTGCTACTCGTGTAAACAAGGATAGTGTAGATGTGAAAGAGCTGAAAGAACAGATTGCTACTCTAAAGGCAGCTCTGGCAAGGAAAAAGGAGAACCAAAACAAACAGTTCTGA 492 0.4614 MRGLMHKLGARRHSGVNSDAGGHSGDAPANTPTVDDHAFLGDEYMASHAADHVIDTPDRVVAPEFELQPSVPINVVSGKRLDVRNYSSWLGQAKTLMFVHISPELDADGETISTVKFAEQFATVELSATRVNKDSVDVKELKEQIATLKAALARKKENQNKQF* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g1022 163 MobiDBLite consensus disorder prediction 12 32 - -
Vvi2g1022 163 Gene3D Kinesin motor domain 86 163 IPR036961 -
Vvi2g1022 163 PANTHER KINESIN-LIKE PROTEIN KLP-3 90 159 IPR027640 GO:0003777|GO:0007018
Vvi2g1022 163 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 89 160 IPR027417 -
Vvi2g1022 163 Coils Coil 131 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g1022 Vvi-Chr2 15384244 15387176 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g1022 K10406 - vri:117924840 149.058