Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g1016 ATGAATCAACCACTTAATATCTTTTCAGGACCTGAAGTTGATAGATTGGCATCAATGGCTGCGAAATACAAAGTCTACTTGGTGATAGGTGTTATTGAGAGAGATGGATACACATTGTATTGCACTGTTCTCTTCTTTGATCCTGAAGGTAATTACCTTGGAAAACATAGGAAACTCATGCCAACATATTGGGAGCGGCTCGTCTGGGGTTTCGGAGATTGCTCGACAACTCCAGTTTATGACACTCCATATGGAAAACTTGGTTCAGTCATTTGTTGGGAAAATAGAATGCCGCTTCTGAGGACAGCAATGTATGGCAAAGGAATTGAGATATATTGTGCTCCTACTGCCGATTCCGGGGATACATGGGTAGCTACAATGAGACACATCGCTATGGAGGGTGGATGCTATGTTCTTTCACCCATCCAGTTCTGTCGGAGGAAAGATTACCCACCTCCACCTGAGTATCTTTACAGTCCTACAGAAGAAGATGTCACTCCAGATTCTATTGTTTGGGCTGGAGGTAGTGTCATCATTTCGCCCCATGGCGAAATTCTAGCAGGACCGAATTATGAAGGAGAAGGCCTCTTCACAGCTGATCTTGATGTTCGTGGAGAGATTCCTAAAGCAAAGTTCCAGTTTGACGTGGTAGGACATTATTCGAGAGCTGATGTGCTAAGCCTCACTGTGAACAATCGTCCACTGCTTCCTGTTACTTTCACATCCTCACCATCTAAAATCAAAGACGATGATGAGATAGATGAATGCAAAGATATAAAAAGATGGGCAATTTAG 795 0.4314 MNQPLNIFSGPEVDRLASMAAKYKVYLVIGVIERDGYTLYCTVLFFDPEGNYLGKHRKLMPTYWERLVWGFGDCSTTPVYDTPYGKLGSVICWENRMPLLRTAMYGKGIEIYCAPTADSGDTWVATMRHIAMEGGCYVLSPIQFCRRKDYPPPPEYLYSPTEEDVTPDSIVWAGGSVIISPHGEILAGPNYEGEGLFTADLDVRGEIPKAKFQFDVVGHYSRADVLSLTVNNRPLLPVTFTSSPSKIKDDDEIDECKDIKRWAI* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g1016 264 ProSiteProfiles Carbon-nitrogen hydrolase domain profile. 1 203 IPR003010 GO:0006807
Vvi2g1016 264 SUPERFAMILY Carbon-nitrogen hydrolase 9 231 IPR036526 -
Vvi2g1016 264 Gene3D - 3 215 IPR036526 -
Vvi2g1016 264 PANTHER NITRILASE 9 244 IPR044149 GO:0003824
Vvi2g1016 264 Pfam Carbon-nitrogen hydrolase 10 203 IPR003010 GO:0006807
Vvi2g1016 264 CDD nitrilases_CHs 10 231 IPR044149 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g1016 Vvi-Chr2 15324167 15325297 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g1016 K13035 - vvi:100853652 521.931