Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g1013 ATGTCTTCAACTGTCAGAGCCACCGTTGTTCAAGCTTCTAGTATCTTTTATGATACTCCTGCCACTCTAGATAAGGCTGAGAGGTTTTTGAAAGAAGCAGCTGCACTAGGATCCCAACTGGTTGTGTTTCCTGAAGCATTTATCGGTGGGTATCCCCGGGGATACAACTTCGCCGACCAGTCGCCAAGAGGGAAAGAAAGTTTCCGCAAGTACCATGCTTCTGCCATTAATGTGCCGGGACCTGAAGTGGATAGATTGGCATCAATGGCTGCGAAATACAAAGTCTACTTAGTGACAGGTGTTGTTGAGAGAGATGGATACACATTGTATTGCACAGTTCTCTTCTTTGATCCTGAAGGTAATTACCTTGGAAAACATAGGAAACTCATGCCAACATATTGGGAGCGGCTCTTCTGGGGTTTCGGAGATTGCTCTACAACTCCAGTTTATGACACTCCATATGGAAAACTTGGTTCGGTCATTTGTTGGGAAAATAGAATGCCACTTTTCAGGACAGCAATGTATGGCAAAGGTATGTCTTTTACCATTTCTTTTTCTTCACTAACTAATATGATTTGGCTTGAAATACATTATGGCTTTGATATGGGATTGATTGATCACAAAATACGAATGTACATCTATATAGGTATTGAGATATATTGTGCTCCTACTGCCGATTCCGGGGATACATGGGTAGCTACAATGAGACACGTCGCTATTGAGGGTGGATGCTATGTTCTTTCACCCATCCAGTTCTGTCGGAGGAAAGATTACCCACCTCCACCTGAGTATCTTTACAGTCCTACAGAAGAAGATGTCACTCCAGATTCTATTGTTTGGGCTGGAGGTAGTGTCATCATTTCGCCCCATGGCGAAATTCTAGCAGGACCGAATTATGAAGGAGAAGGCCTCTTCACAGCTGATCTTGATGTTCGTGGAGAGATTCCTAAAGCAAAGTTCCAGTTCGATGTGGTAGGACATTATTCGAGAGCTGATGTGCTAAGCCTCACTGTGAACAATCGTCCACTGCTTCCTGTTACTTTCACATCCTCACCATCTAAAATCAAAGACAATGAGGAGATGGATGAATGCAAAGATATATAA 1104 0.4312 MSSTVRATVVQASSIFYDTPATLDKAERFLKEAAALGSQLVVFPEAFIGGYPRGYNFADQSPRGKESFRKYHASAINVPGPEVDRLASMAAKYKVYLVTGVVERDGYTLYCTVLFFDPEGNYLGKHRKLMPTYWERLFWGFGDCSTTPVYDTPYGKLGSVICWENRMPLFRTAMYGKGMSFTISFSSLTNMIWLEIHYGFDMGLIDHKIRMYIYIGIEIYCAPTADSGDTWVATMRHVAIEGGCYVLSPIQFCRRKDYPPPPEYLYSPTEEDVTPDSIVWAGGSVIISPHGEILAGPNYEGEGLFTADLDVRGEIPKAKFQFDVVGHYSRADVLSLTVNNRPLLPVTFTSSPSKIKDNEEMDECKDI* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g1013 367 CDD nitrilases_CHs 5 339 IPR044149 GO:0003824
Vvi2g1013 367 ProSitePatterns Nitrilases / cyanide hydratase signature 1. 37 52 IPR000132 GO:0003824
Vvi2g1013 367 PANTHER NITRILASE 3 353 IPR044149 GO:0003824
Vvi2g1013 367 SUPERFAMILY Carbon-nitrogen hydrolase 3 339 IPR036526 -
Vvi2g1013 367 ProSiteProfiles Carbon-nitrogen hydrolase domain profile. 5 311 IPR003010 GO:0006807
Vvi2g1013 367 Gene3D - 1 323 IPR036526 -
Vvi2g1013 367 Pfam Carbon-nitrogen hydrolase 6 311 IPR003010 GO:0006807
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g1013 Vvi-Chr2 15294962 15296781 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g1013 K13035 - vvi:100263621 667.537