Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g1012 ATGTCTTCAACTGTTAGAGCCACCGTTGTTCAAGCTTCTAGTATCTTTTATGATACTCCTGCCACTCTAGATAAGGCTGAGAGGTTTTTGAAAGAAGCAGCTGCACTAGGATCCCAACTGGTTGTGTTTCCTGAAGCATTTATCGGTGGGTATCCCCGGGGATACAACTTTGCCGACCAGTCGCCAAGAGGGAAAGAAAGTTTCCGCAAGTACCATGCTTCTGCCATTAATGTGCCGGGACCTGAAGCGGATAGATTGGCATCAATGGCTGCGAAATACAAAGTCTACTTAGTGACAGGCGTTGTTGAGAGAGATGGATACACATTGTATTCCACAGTTCTCTTCTTTGATCCTGAAGGTAATTACCTTGGAAAACATAGGAAACTCATGCCAACATATTGGGAGCGGCTGTTCTGGGGTTTCGGAGATTGCTCGACAACTCCAGTTTATGACACTCCATATGGAAAACTTGGTTCGGTCATTTGTTGGGAAAATAGAATGCCACTTTTCAGGACAGCAATGTATGGCAAAGGTATTGAGATATATTGTGCTCCTACTGCCGATTCCGGGGATACATGGGTAGCTACAATGAGACACGTCGCTATTGAGGGTGGATGCTATGTTCTTTCACCCATCCAGTTCTGTCGGAGGAAAGATTACCCACCTCCACCTGAGTATCTTTACAGTCCTACAGAAGAAGATGTCACTCCAGATTCTATTGTTTGGGCTGGAGGTAGTGTCATCATTTCGCCCCATGGCGAAATTCTAGCAGGACCGAATTATGAAGGAGAAGGCCTCTTCACAGCTGATCTTGATGTTCGTGGAGAGATTCCTAAAGCAAAGTTCCAGTTCGATGTGGTAGGACATTATTCGAGAGCTGATGTGCTAAGCCTCACTGTGAACAATCGTCCACTGCTTCCTGTTACTTTCACATCCTCACCATCTAAAATCAAAGACAATGAGGAGATGGATGAATGCAAAGATATATAA 990 0.4485 MSSTVRATVVQASSIFYDTPATLDKAERFLKEAAALGSQLVVFPEAFIGGYPRGYNFADQSPRGKESFRKYHASAINVPGPEADRLASMAAKYKVYLVTGVVERDGYTLYSTVLFFDPEGNYLGKHRKLMPTYWERLFWGFGDCSTTPVYDTPYGKLGSVICWENRMPLFRTAMYGKGIEIYCAPTADSGDTWVATMRHVAIEGGCYVLSPIQFCRRKDYPPPPEYLYSPTEEDVTPDSIVWAGGSVIISPHGEILAGPNYEGEGLFTADLDVRGEIPKAKFQFDVVGHYSRADVLSLTVNNRPLLPVTFTSSPSKIKDNEEMDECKDI* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g1012 329 PANTHER NITRILASE 3 315 IPR044149 GO:0003824
Vvi2g1012 329 ProSitePatterns Nitrilases / cyanide hydratase signature 1. 37 52 IPR000132 GO:0003824
Vvi2g1012 329 Gene3D - 1 285 IPR036526 -
Vvi2g1012 329 Pfam Carbon-nitrogen hydrolase 6 273 IPR003010 GO:0006807
Vvi2g1012 329 CDD nitrilases_CHs 5 301 IPR044149 GO:0003824
Vvi2g1012 329 FunFam Bifunctional nitrilase/nitrile hydratase NIT4B 1 286 - -
Vvi2g1012 329 ProSiteProfiles Carbon-nitrogen hydrolase domain profile. 5 273 IPR003010 GO:0006807
Vvi2g1012 329 SUPERFAMILY Carbon-nitrogen hydrolase 3 301 IPR036526 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g1012 Vvi-Chr2 15250221 15252040 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g1012 K13035 - vvi:100241359 684.485