Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g1009 ATGGTTGGGAGAGATGAAATTGAGAGAAAAGAAAAGAGGCACAAAGATGAAATAGAAGTGAGGAAGGAAATCAGGAGGGAGAAAGGAAAACAACCACTGTCTAAGACTAAAATGTTGAAGAAAGATAAGGCTGAGAGGTTTTTGAAAGAAGCAGCTGCAGTAGAATCCCAACTGGTTGTGTTTCCTGAAGCATTTATCGGTGGGTATCCCCGGGGATACAACTTCGCCGACCAGTCACCAAGAGGGAAAGAAAGTTTCCTCAAGTACCATGCTTCTGCCATTAATGTGCCGGGATCTGAAGTGGATAGATTGGCATCAATGGCTGCGAAATACAAAGTCTACTTAGTGACAGGTGTTGTTGTGAGAGATGGATACACATTGTATTGCACTGTTCTCTTCTTTGATCCTGAAGGTAATTACCTTGGAAAACATAGGAAACTCGTGCCAACATATTGGGAGCGGCTCTTCTGGGGTTTCGCAGATTGCTCGACAACTCCAGTTTATGACACTCCATATGGAAAACTTGGTTCGGTCATTTGTTGGGAAAATAGAATGCCGCTTTTCAGGACAGCAATGTATGGCAAAGGTATTGAGATATATTGTGCTCCTACTGCCGATTCCAGGGATACATGGGTAGCTACAATGAGACACGTCGCTATTGAGGGTGGATGCTATGTTCTTTCACCCATCCAGTTCTGTCGGAGGAAAGATTACCCACCTCCACCTGAGTATCTTTACAGTCCTACAGAAGAAGATGTCACTCCAGATTCTATTGTTTGGGTTGGAGGTAGTGTCATCATTTCGCCCCATGGCAAAATTCTACCAGGACCAAATTATGAAGGAGAAGGCCTCTTCACAGCTGATCTTGATGTTCGTAACGAGATTCCTAAAGCAAAGTTCCAGTTCGATGCAGTAGGACATTATTCGAGAGCTGATGTGCTAAGCCTCACTGTGAACAATCGTCCACTGCTTCCTGTTACTTTCACATCCTCACCATCTAAAATCAAAGACGATGAGGAGATGGATGAATGCAAAGATATATAA 1044 0.4358 MVGRDEIERKEKRHKDEIEVRKEIRREKGKQPLSKTKMLKKDKAERFLKEAAAVESQLVVFPEAFIGGYPRGYNFADQSPRGKESFLKYHASAINVPGSEVDRLASMAAKYKVYLVTGVVVRDGYTLYCTVLFFDPEGNYLGKHRKLVPTYWERLFWGFADCSTTPVYDTPYGKLGSVICWENRMPLFRTAMYGKGIEIYCAPTADSRDTWVATMRHVAIEGGCYVLSPIQFCRRKDYPPPPEYLYSPTEEDVTPDSIVWVGGSVIISPHGKILPGPNYEGEGLFTADLDVRNEIPKAKFQFDAVGHYSRADVLSLTVNNRPLLPVTFTSSPSKIKDDEEMDECKDI* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g1009 347 CDD nitrilases_CHs 42 319 IPR044149 GO:0003824
Vvi2g1009 347 PANTHER NITRILASE 37 333 IPR044149 GO:0003824
Vvi2g1009 347 Coils Coil 7 27 - -
Vvi2g1009 347 ProSiteProfiles Carbon-nitrogen hydrolase domain profile. 20 291 IPR003010 GO:0006807
Vvi2g1009 347 SUPERFAMILY Carbon-nitrogen hydrolase 42 319 IPR036526 -
Vvi2g1009 347 Pfam Carbon-nitrogen hydrolase 42 291 IPR003010 GO:0006807
Vvi2g1009 347 Gene3D - 32 304 IPR036526 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g1009 Vvi-Chr2 15083113 15086780 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g1009 K13035 - vvi:100263621 613.994