Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0999 ATGGCATCTCTCTCTGTTTGCAAAACCACTGTATTTGATAATCTCTGCCATAATGCTTCCTACCTTACAGAAATGCTAAATTTAGCTAAACAATGGGGATGGACTGGCAATGACACTGAAACTCATCTGGGAAAACTTCTGAAGCAGATGATTGATGAGAGTGACCCTAAATTACCATTTGGATACATCAAATTGGATGAGGTAGCAAGACATGCAAAAATAAACTCTCCTCCCCTCAGGACCATGATGAGCGCCCTGAACAAGGAGGGATATGCTGTTAGCAGGTCACACATTGCCTCCAACGCAATTAAGACAAACTGCCCAATGGCAGTCTGCATTAGGATTGCAAAGGAACTTCAGCAATGTTGA 369 0.4255 MASLSVCKTTVFDNLCHNASYLTEMLNLAKQWGWTGNDTETHLGKLLKQMIDESDPKLPFGYIKLDEVARHAKINSPPLRTMMSALNKEGYAVSRSHIASNAIKTNCPMAVCIRIAKELQQC* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0999 122 FunFam tRNA (guanine(26)-N(2))-dimethyltransferase 59 118 - -
Vvi2g0999 122 Gene3D - 59 119 IPR042296 -
Vvi2g0999 122 PANTHER N 2 ,N 2 -DIMETHYLGUANOSINE TRNA METHYLTRANSFERASE 16 118 IPR002905 GO:0003723|GO:0004809|GO:0008033
Vvi2g0999 122 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 16 117 IPR029063 -
Vvi2g0999 122 ProSiteProfiles Trm1 methyltransferase domain profile. 1 116 IPR002905 GO:0003723|GO:0004809|GO:0008033
Vvi2g0999 122 Pfam N2,N2-dimethylguanosine tRNA methyltransferase 17 115 IPR002905 GO:0003723|GO:0004809|GO:0008033
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0999 Vvi-Chr2 14614997 14616258 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0999 K00555 - vvi:100243386 213.772