Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0998 ATGGAGCCAAGCCGGAGCAGAACCTCTCCAGACTCGGCAGCGGAGGAGGATCTGAGTGGGTTTGGTTCAAAACAGCCTGTATATTCGGATTTGGATGCAAAGAGTGATTTGGGAAAGAAGCCTTCTCAGAGGATGCAGTCACGGGCTATAATTATGTACGAAGTTTGGGAATTGAACAAGAAGAAGGACGTTGTGTGCTTTATTTTATCATATCCTCCTTTCAACTCCCGGAACAATGAAACACACGGAGGCTGGATTCGACATGTTCTGGAGATTAATCACAAAGTAAGAGAAGAACTTCACACGGAGAAAGAAGTGAGTATTTCAGAGCTCTCTTCTGAAATCACTAGATTGCTTCATCATTCAATCCATGATATCGAAGCTCATGTTCCATCAGACATCATTGGGAAGATGTGTGAGTGGTGGTCTCCAAGGCATACAACACCTAAGAAGGCAATGCTGGATTTGTGTATTGATGATTTTATGATTCGCCAATTTTTACAAGGTATACAAATTCCCGAAATCCGGAGGATTTTGATTTCAGAAGTAAATGATGAAACCTTTCTGTGCAGACTGAAGAATCTTCCACCAATAAGGCAAATGTTTGATCTCGTCATTCAAGTTAATGTCAAGTTTTGTCTGAAAATTAAAGATATAGAGGATAGAATCATAGAAGAATTGGGTTTCTCAACATCCAGCAGAGGGGAAGCAGAGCAATTATTGAGAAGCCAAAATTTCTTAATCCTTCTTGATGACTTCGATACACGGAGAATAAATTTGCATGACCTGGGGAATGGCTGGTGGAACTCAGACAACACTCAAAAGATAGCTTTGATAAGCTTTCTAGTTCATCCAGAGGTGCCAGTGGATCTGGAGATTAAGAGGAACCATCATCTATTATCATGGGAATTATTTAGTATGAATGTTGGTGAAGTTGTGCATTCTTCAACTATCCAGAAACTAGCTGTACATGTGTTGAAACAATGCTCTGGCCATTTACTAGCCACTGTTCTAATGGCAAGAGCCTTAAAAGAGGTCAAGGATGTTCGTATCTGGCAGCATGCATCTCGGGTAATAAGCTTTCTACCAACATCACACACCGAAGATAGAATTTTGCTTAATGCATTATCATTTGTTCTGGGGCATTTAGGTTCTGCAAATAAATATGTAAAATATTGTGCATCTTATCTAGAGATAGAAGGAACATACAAAGTGGATTTGCTTGAAAGGTGGATGAATGAAGACTTAATCGGAACACTCGATGAAGGAGAACAGATTGTTCAACATCTTGTCAATGCCCTCTTGTTGGAAAGCTTTCAGAATGGACAGTCAATTCGAATGCGAGATGAAATCCGTAAGGAGTTAATGAATTTTTATAAAGCCGAAACGAATCCAATACTACTTGTTGAACTAGATGGAAGAGGACTCATGGAGGCACCAAAAAATGGGGTATGGGAGGAAGCTAATGAGATGCATTTGATGAATAATAAAATATCCAAGCTACCAGATAATCCAAATAGCCCTAAACTCAGCGTATTGTTCTTACAAGGTGATGACAGATATGGTGTGCTTCAATCACTAGAGTACTTGTATCTTCATTATATGAAGAATCTAAGGAGCATCTGGAAAGGGCCACCTATTTGGATGGGTTTGCTATCCAATCTAAAAGTTTTGGCATTGCATACCTGCCCCGAATTGGCTACCATTTTTACTTTCAATATTCTTCAACAGTGCTGCAACTTAGAGGAGCTTGTGGTTGAAGACTGCCCTGAAATCAACAGCATAGTGAATCATAAAGTTCTTGCTAAAGATGTAGGGCCATGGGCATGGTATCTGCCAAAGTTGAAGAAGATGTCCATTCATTACATGCCTAAATTGGTCAGCATTTCCCAAGGTGTACTGATTGCACCAAACTTAGAATGGCTAAGCCTCTATGATTGCCCGAGCCTCAAAATTCTCTCCCCAGAGGAAGTTAGCAGTTGTAAATTAAAGGTCATAATAGGAGAGGCAGACTGGTGGAGTGCATTGGAGTGGAAAAAATCAGAACGGTTTCAACCACCAAATCTGGATGCTATCTTTGTGCCAATTGAAAGGGACATAGATTTGAGGACACAGTTAGCAGAAATTAATGATCAGCTTCAAGCTCAGATGCAAAAAACAGAGCCCTCTCAACAGTCAGGTTCTGGTGACTCTCTGAAGGCCCCTGCAGTTGAGGCTGGAACAAGTGCAAAGCAGAAGCAAATGAAGCTCGGGCATCTTTTCATGAAGTGGCCACTCTCAGAACTCCATCCTTTTCTCATTCAAGTTCCCTGA 2313 0.4081 MEPSRSRTSPDSAAEEDLSGFGSKQPVYSDLDAKSDLGKKPSQRMQSRAIIMYEVWELNKKKDVVCFILSYPPFNSRNNETHGGWIRHVLEINHKVREELHTEKEVSISELSSEITRLLHHSIHDIEAHVPSDIIGKMCEWWSPRHTTPKKAMLDLCIDDFMIRQFLQGIQIPEIRRILISEVNDETFLCRLKNLPPIRQMFDLVIQVNVKFCLKIKDIEDRIIEELGFSTSSRGEAEQLLRSQNFLILLDDFDTRRINLHDLGNGWWNSDNTQKIALISFLVHPEVPVDLEIKRNHHLLSWELFSMNVGEVVHSSTIQKLAVHVLKQCSGHLLATVLMARALKEVKDVRIWQHASRVISFLPTSHTEDRILLNALSFVLGHLGSANKYVKYCASYLEIEGTYKVDLLERWMNEDLIGTLDEGEQIVQHLVNALLLESFQNGQSIRMRDEIRKELMNFYKAETNPILLVELDGRGLMEAPKNGVWEEANEMHLMNNKISKLPDNPNSPKLSVLFLQGDDRYGVLQSLEYLYLHYMKNLRSIWKGPPIWMGLLSNLKVLALHTCPELATIFTFNILQQCCNLEELVVEDCPEINSIVNHKVLAKDVGPWAWYLPKLKKMSIHYMPKLVSISQGVLIAPNLEWLSLYDCPSLKILSPEEVSSCKLKVIIGEADWWSALEWKKSERFQPPNLDAIFVPIERDIDLRTQLAEINDQLQAQMQKTEPSQQSGSGDSLKAPAVEAGTSAKQKQMKLGHLFMKWPLSELHPFLIQVP* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0998 770 MobiDBLite consensus disorder prediction 715 740 - -
Vvi2g0998 770 MobiDBLite consensus disorder prediction 715 731 - -
Vvi2g0998 770 Gene3D Ribonuclease Inhibitor 468 669 IPR032675 -
Vvi2g0998 770 SUPERFAMILY L domain-like 468 662 - -
Vvi2g0998 770 Pfam NB-ARC domain 196 360 IPR002182 GO:0043531
Vvi2g0998 770 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 198 388 IPR027417 -
Vvi2g0998 770 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 506 664 - -
Vvi2g0998 770 Gene3D - 298 372 IPR042197 -
Vvi2g0998 770 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0998 Vvi-Chr2 14558378 14566619 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0998 - - vvi:100246578 1038.1